C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: biogenesis of lysosomal organelles complex-1, subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153731 Bloc1s1-003 ENSMUSG00000090247 10090 - 10:128917882-128923524 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HO CIL_0007HO_0002 CGP 10:128913593-128924035

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0031083 IDA BLOC-1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257895 RDH5-001 protein_coding Homo_sapiens 0 318
ENST00000257899 BLOC1S1-004 nonsense_mediated_decay Homo_sapiens 0 749
ENST00000547072 RDH5-008 protein_coding Homo_sapiens 0 318
ENST00000547076 BLOC1S1-006 protein_coding Homo_sapiens 0 326
ENST00000548082 RDH5-002 protein_coding Homo_sapiens 0 318
ENST00000548486 RDH5-004 retained_intron Homo_sapiens 0 318
ENST00000548556 BLOC1S1-007 protein_coding Homo_sapiens 0 228
ENST00000548925 BLOC1S1-001 protein_coding Homo_sapiens 0 438
ENST00000549147 BLOC1S1-002 protein_coding Homo_sapiens 0 436
ENST00000549424 BLOC1S1-003 protein_coding Homo_sapiens 0 342
ENST00000550412 BLOC1S1-001 protein_coding Homo_sapiens 0 749
ENST00000550608 RDH5-003 retained_intron Homo_sapiens 0 318
ENST00000551926 BLOC1S1-008 protein_coding Homo_sapiens 0 324
ENST00000551946 BLOC1S1-002 nonsense_mediated_decay Homo_sapiens 0 542
ENST00000553100 BLOC1S1-005 nonsense_mediated_decay Homo_sapiens 0 231
ENST00000553187 RDH5-009 retained_intron Homo_sapiens 0 318

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