C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: biogenesis of lysosomal organelles complex-1, subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000548925 BLOC1S1-001 ENSG00000135441 9606 + 12:55716037-55719703 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000548925
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000548925 124.901±0.00 90.043±0.00 9.245±0.00 76.698±47.29 13.428±0.00 49.287±34.96 66.511±44.20 128.614±0.00 51.374±45.17 137.550±0.00 93.497±49.30 90.926±17.17 53.177±11.68

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005758 IDA mitochondrial intermembrane space
GO:0005759 IDA mitochondrial matrix
GO:0005765 TAS lysosomal membrane
GO:0005829 IDA cytosol
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0008089 ISS anterograde axon cargo transport
GO:0009060 IMP aerobic respiration
GO:0018394 IMP peptidyl-lysine acetylation
GO:0031083 IDA BLOC-1 complex
GO:0031175 ISS neuron projection development
GO:0032438 NAS melanosome organization
GO:0048490 ISS anterograde synaptic vesicle transport
GO:0060155 NAS platelet dense granule organization
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026405 Bloc1s1-001 protein_coding Mus_musculus 0 612
ENSMUST00000069529 Gm7936-201 processed_pseudogene Mus_musculus 0 545
ENSMUST00000131271 Bloc1s1-004 protein_coding Mus_musculus 0 499
ENSMUST00000135161 Rdh5-007 protein_coding Mus_musculus 0 499
ENSMUST00000153731 Bloc1s1-003 protein_coding Mus_musculus 0 438
ENSMUST00000141320 Bloc1s1-005 processed_transcript Mus_musculus 0 259

Loading