C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor subfamily 1, group I, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155126 Nr1i3-003 ENSMUSG00000005677 10090 + 1:171213986-171220701 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000155126
Transcript ID Liver
ENSMUST00000155126 11.147±5.65

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003707 IEA steroid hormone receptor activity
GO:0004887 IEA thyroid hormone receptor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0030522 IEA intracellular receptor signaling pathway
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0045892 IDA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367987 TOMM40L-002 protein_coding Homo_sapiens 0 333
ENST00000367988 TOMM40L-001 protein_coding Homo_sapiens 0 333
ENST00000465512 TOMM40L-005 processed_transcript Homo_sapiens 3.00004e-41 172
ENST00000468803 TOMM40L-007 processed_transcript Homo_sapiens 0 276
ENST00000470426 TOMM40L-004 processed_transcript Homo_sapiens 0 193
ENST00000474486 TOMM40L-003 processed_transcript Homo_sapiens 0 333
ENST00000475793 TOMM40L-008 processed_transcript Homo_sapiens 0 211
ENST00000492482 TOMM40L-006 processed_transcript Homo_sapiens 0 333
ENST00000545897 TOMM40L-201 protein_coding Homo_sapiens 0 333

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