C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane and ubiquitin-like domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156326 Tmub2-003 ENSMUSG00000034757 10090 + 11:102285196-102289237 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000156326
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000156326 6.508±0.42 11.520±1.67 5.849±0.35 10.890±5.98 7.587±3.62 7.041±0.81 2.520±0.33 3.878±0.61 3.309±0.96 5.250±0.98 2.098±0.57 5.101±1.36 3.549±2.43 3.609±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0002 VISTA 11:102063033-102664797
CIL_0000KZ CIL_0000KZ_0003 CGP 11:102268743-102289237
CIL_0003L7 CIL_0003L7_0003 CGP 11:102284931-102296631

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319511 TMUB2-002 protein_coding Homo_sapiens 0 1334
ENST00000357984 TMUB2-201 protein_coding Homo_sapiens 0 1334
ENST00000446571 TMUB2-003 protein_coding Homo_sapiens 0 335
ENST00000538716 TMUB2-001 protein_coding Homo_sapiens 0 1402
ENST00000587172 TMUB2-008 protein_coding Homo_sapiens 0 333
ENST00000587326 TMUB2-007 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000587775 TMUB2-014 nonsense_mediated_decay Homo_sapiens 3e-25 119
ENST00000587989 TMUB2-004 protein_coding Homo_sapiens 0 1402
ENST00000588413 TMUB2-013 nonsense_mediated_decay Homo_sapiens 2e-24 117
ENST00000589184 TMUB2-005 protein_coding Homo_sapiens 4e-24 117
ENST00000589785 TMUB2-009 protein_coding Homo_sapiens 0 1332
ENST00000589856 TMUB2-011 protein_coding Homo_sapiens 0 566
ENST00000590235 TMUB2-006 protein_coding Homo_sapiens 0 333
ENST00000592825 TMUB2-010 protein_coding Homo_sapiens 0 333

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