C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL2-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156688 Bcl2l1-006 ENSMUSG00000007659 10090 - 2:152829757-152831710 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000156688
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000156688 84.318±0.00 45.612±0.00 119.773±44.15 49.735±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008K5 CIL_0008K5_0002 VISTA 2:152434876-153035572
CIL_00089Z CIL_00089Z_0002 VISTA 2:152488201-153091382
CIL_0008N4 CIL_0008N4_0002 VISTA 2:152517372-153118197
CIL_0004MW CIL_0004MW_0003 CGP 2:152754173-152831728
CIL_0001A2 CIL_0001A2_0002 CGP 2:152780668-152895321

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001541 IGI ovarian follicle development
GO:0001701 IMP in utero embryonic development
GO:0001836 IGI release of cytochrome c from mitochondria
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005739 IDA mitochondrion
GO:0005741 IBA mitochondrial outer membrane
GO:0005829 IDA cytosol
GO:0007281 IGI germ cell development
GO:0007283 IGI spermatogenesis
GO:0008283 IDA cell proliferation
GO:0008284 IDA positive regulation of cell proliferation
GO:0008584 IMP male gonad development
GO:0008630 IMP intrinsic apoptotic signaling pathway in response to DNA damage
GO:0009314 IMP response to radiation
GO:0009566 IGI fertilization
GO:0009615 IDA response to virus
GO:0019050 ISO suppression by virus of host apoptotic process
GO:0031966 IDA mitochondrial membrane
GO:0034097 ISO response to cytokine
GO:0040007 IMP growth
GO:0042803 IBA protein homodimerization activity
GO:0043065 IDA positive regulation of apoptotic process
GO:0043066 IMP negative regulation of apoptotic process
GO:0043524 IGI negative regulation of neuron apoptotic process
GO:0046898 IDA response to cycloheximide
GO:0046982 IPI protein heterodimerization activity
GO:0051402 IGI neuron apoptotic process
GO:0060154 IMP cellular process regulating host cell cycle in response to virus
GO:0070584 IGI mitochondrion morphogenesis
GO:0071230 IMP cellular response to amino acid stimulus
GO:0071312 IDA cellular response to alkaloid
GO:0071480 IMP cellular response to gamma radiation
GO:0071839 IMP apoptotic process in bone marrow
GO:0097192 IMP extrinsic apoptotic signaling pathway in absence of ligand
GO:0097284 IMP hepatocyte apoptotic process
GO:2001243 IBA negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307677 BCL2L1-004 protein_coding Homo_sapiens 0 529
ENST00000376055 BCL2L1-002 protein_coding Homo_sapiens 0 529
ENST00000376062 BCL2L1-001 protein_coding Homo_sapiens 0 532
ENST00000420488 BCL2L1-006 protein_coding Homo_sapiens 0 665
ENST00000422920 BCL2L1-008 protein_coding Homo_sapiens 0 507
ENST00000434194 BCL2L1-009 protein_coding Homo_sapiens 0 394
ENST00000439267 BCL2L1-005 protein_coding Homo_sapiens 0 560
ENST00000450273 BCL2L1-003 protein_coding Homo_sapiens 0 512
ENST00000456404 BCL2L1-007 protein_coding Homo_sapiens 0 534

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