C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001A2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171552-ENSG00000088325 CGP 9606 20:31664452-31801805
GeneTranscriptPositionBiotype
ENSG00000088325 (TPX2)
TPX2, microtubule-associated 		ENST00000300403 (TPX2-001) 31739271-31801805 protein_coding
ENST00000340513 (TPX2-002) 31739271-31801805 protein_coding
ENSG00000171552 (BCL2L1)
BCL2-like 1 		ENST00000307677 (BCL2L1-004) 31664452-31722898 protein_coding
ENST00000376055 (BCL2L1-002) 31664452-31722860 protein_coding
ENST00000376062 (BCL2L1-001) 31664452-31722597 protein_coding
ENST00000420488 (BCL2L1-006) 31721655-31723989 protein_coding
ENST00000422920 (BCL2L1-008) 31721655-31723098 protein_coding
ENST00000434194 (BCL2L1-009) 31722073-31722548 protein_coding
ENST00000439267 (BCL2L1-005) 31721676-31723989 protein_coding
ENST00000450273 (BCL2L1-003) 31666035-31723900 protein_coding
ENST00000456404 (BCL2L1-007) 31721655-31723954 protein_coding
ENSG00000236559 (RP11-243J16.7)
 ENST00000412972 (RP11-243J16.7-001) 31686216-31716825 antisense
CIL_0001A2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000007659-ENSMUSG00000027469 CGP 10090 2:152780668-152895321
GeneTranscriptPositionBiotype
ENSMUSG00000007659 (Bcl2l1)
BCL2-like 1 		ENSMUST00000007803 (Bcl2l1-001) 152780668-152831728 protein_coding
ENSMUST00000109820 (Bcl2l1-201) 152780672-152830666 protein_coding
ENSMUST00000128172 (Bcl2l1-002) 152829427-152831112 protein_coding
ENSMUST00000134357 (Bcl2l1-007) 152829529-152830652 protein_coding
ENSMUST00000134902 (Bcl2l1-003) 152828127-152830641 protein_coding
ENSMUST00000140436 (Bcl2l1-004) 152828362-152830310 protein_coding
ENSMUST00000146380 (Bcl2l1-005) 152829701-152830618 protein_coding
ENSMUST00000156688 (Bcl2l1-006) 152829757-152831710 protein_coding
ENSMUST00000173755 (Bcl2l1-008) 152781411-152828535 processed_transcript
ENSMUSG00000027469 (Tpx2)
TPX2, microtubule-associated protein homolog (Xenopus laevis) 		ENSMUST00000028969 (Tpx2-001) 152847995-152894654 protein_coding
ENSMUST00000109816 (Tpx2-002) 152847978-152894654 protein_coding
ENSMUST00000136407 (Tpx2-003) 152848082-152854949 processed_transcript
ENSMUST00000143740 (Tpx2-005) 152882269-152884437 retained_intron
ENSMUST00000144848 (Tpx2-004) 152869601-152881065 retained_intron
ENSMUST00000164120 (Tpx2-201) 152847964-152895321 protein_coding
ENSMUST00000178997 (Tpx2-202) 152847964-152895321 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001A2_0001ENSG00000088325ENST00000300403ENST00000340513ENSG00000171552ENST00000307677ENST00000376055ENST00000376062ENST00000420488ENST00000422920ENST00000434194ENST00000439267ENST00000450273ENST00000456404ENSG00000236559ENST00000412972CIL_0001A2_0002ENSMUSG00000007659ENSMUST00000007803ENSMUST00000109820ENSMUST00000128172ENSMUST00000134357ENSMUST00000134902ENSMUST00000140436ENSMUST00000146380ENSMUST00000156688ENSMUST00000173755ENSMUSG00000027469ENSMUST00000028969ENSMUST00000109816ENSMUST00000136407ENSMUST00000143740ENSMUST00000144848ENSMUST00000164120ENSMUST00000178997
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001A2_0001ENSG00000088325ENST00000300403ENST00000340513ENSG00000171552ENST00000307677ENST00000376055ENST00000376062ENST00000422920ENST00000434194ENST00000450273ENSG00000236559ENST00000412972CIL_0001A2_0002ENSMUSG00000007659ENSMUST00000007803ENSMUST00000109820ENSMUST00000128172ENSMUST00000134357ENSMUST00000156688ENSMUST00000173755ENSMUSG00000027469ENSMUST00000028969ENSMUST00000109816ENSMUST00000136407ENSMUST00000143740ENSMUST00000144848ENSMUST00000164120ENSMUST00000178997
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088325 ENST00000300403 0.259±0.00 0.191±0.00 0.067±0.00 0.572±0.06 2.503±0.00 3.395±0.00 0.035±0.00 0.031±0.00 0.269±0.22 0.327±0.00 0.268±0.00 15.240±12.57 5.379±1.74 21.570±1.07
ENST00000340513 0.553±0.00 0.757±0.00 N/A 0.140±0.00 1.110±0.00 0.677±0.00 0.408±0.00 0.191±0.00 0.581±0.00 0.877±0.00 0.276±0.00 0.105±0.00 N/A N/A
ENSG00000171552 ENST00000307677 48.059±0.00 27.348±0.00 5.945±0.00 16.801±0.00 9.373±3.41 16.803±12.27 12.198±11.47 15.025±10.33 13.459±8.68 29.671±24.76 6.319±0.00 21.621±20.59 39.059±13.89 23.884±4.30
ENST00000376055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.418±0.00 N/A N/A N/A
ENST00000376062 N/A N/A 1.641±0.00 2.322±0.00 N/A 0.989±0.00 1.175±0.00 1.333±0.00 N/A 2.602±0.00 N/A N/A N/A N/A
ENST00000420488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422920 N/A N/A 4.012±0.00 N/A 8.661±0.00 3.290±0.00 3.022±0.00 3.058±0.00 4.779±0.00 4.312±0.00 N/A 13.515±0.00 N/A 29.398±0.00
ENST00000434194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.645±0.00 N/A N/A N/A
ENST00000439267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 123.602±0.00 72.492±0.00 61.231±0.00
ENST00000456404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236559 ENST00000412972 0.037±0.00 1.062±0.00 N/A 0.117±0.00 N/A N/A N/A 0.110±0.00 0.208±0.00 N/A N/A 0.109±0.00 N/A 0.531±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007659 ENSMUST00000007803 17.093±1.65 12.850±5.23 22.563±4.77 30.320±2.89 14.833±7.07 16.677±3.82 10.802±1.29 28.100±2.56 28.037±18.82 40.790±5.41 2.078±0.85 18.848±8.16 28.679±18.07 18.221±5.64
ENSMUST00000109820 2.766±0.07 2.678±0.15 8.149±1.90 7.086±1.63 2.111±0.51 3.087±0.76 2.952±0.59 8.135±0.91 11.367±9.25 8.653±2.03 2.366±0.54 4.051±1.27 13.089±9.10 4.716±1.05
ENSMUST00000128172 N/A N/A N/A 13.190±0.00 N/A N/A N/A N/A N/A N/A N/A 12.880±0.00 N/A 19.281±0.00
ENSMUST00000134357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 70.812±0.00 N/A
ENSMUST00000134902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156688 N/A N/A N/A 84.318±0.00 N/A N/A N/A N/A N/A N/A N/A 45.612±0.00 119.773±44.15 49.735±0.00
ENSMUST00000173755 N/A 6.240±0.00 N/A N/A 8.147±3.20 N/A N/A N/A 4.072±0.37 N/A 1.770±0.00 9.302±0.15 37.063±0.00 N/A
ENSMUSG00000027469 ENSMUST00000028969 0.516±0.00 0.160±0.09 0.293±0.06 0.994±0.00 0.312±0.09 0.572±0.19 N/A 0.112±0.00 6.730±3.37 0.243±0.12 0.193±0.09 0.742±0.21 4.472±0.96 N/A
ENSMUST00000109816 0.653±0.21 0.327±0.20 0.456±0.24 3.496±2.69 N/A 0.722±0.00 0.075±0.02 0.038±0.00 17.805±17.86 0.173±0.00 0.246±0.04 2.323±1.12 8.671±6.55 2.811±0.94
ENSMUST00000136407 N/A 0.235±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143740 N/A 0.750±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.237±0.00 N/A
ENSMUST00000144848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.388±0.00
ENSMUST00000164120 0.114±0.00 N/A 0.359±0.00 2.823±1.38 0.469±0.00 0.574±0.08 N/A 0.098±0.05 5.007±1.73 0.230±0.07 N/A 0.805±0.44 2.975±1.60 1.060±0.37
ENSMUST00000178997 0.423±0.00 N/A 0.149±0.00 1.842±0.19 0.300±0.05 0.789±0.00 0.031±0.00 0.120±0.00 3.169±2.72 0.081±0.02 N/A 0.983±0.49 2.775±1.93 1.207±0.45

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