C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coenzyme Q9 homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159424 Coq9-002 ENSMUSG00000031782 10090 + 8:94838405-94850717 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryENSMUST00000159424
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000159424 49.479±9.51 98.574±13.92 138.094±18.99 75.576±24.44 138.093±3.31 72.790±3.73 59.793±3.45 27.578±8.82 57.361±12.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZF CIL_0003ZF_0002 CGP 8:94810453-94838358
CIL_0003ZC CIL_0003ZC_0002 CGP 8:94819818-94854895
CIL_0003ZD CIL_0003ZD_0002 CGP 8:94838321-94864242

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262507 COQ9-001 protein_coding Homo_sapiens 0 638
ENST00000562426 COQ9-006 retained_intron Homo_sapiens 0 518
ENST00000562734 COQ9-004 retained_intron Homo_sapiens 0 488
ENST00000563166 COQ9-015 protein_coding Homo_sapiens 0 257
ENST00000563391 COQ9-010 protein_coding Homo_sapiens 0 556
ENST00000564115 COQ9-014 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000564655 COQ9-016 protein_coding Homo_sapiens 0 582
ENST00000565964 COQ9-013 protein_coding Homo_sapiens 0 337
ENST00000566388 COQ9-002 retained_intron Homo_sapiens 0 337
ENST00000567072 COQ9-005 protein_coding Homo_sapiens 0 464
ENST00000567384 COQ9-011 processed_transcript Homo_sapiens 6e-32 141
ENST00000567480 COQ9-008 retained_intron Homo_sapiens 0 364
ENST00000567576 COQ9-009 retained_intron Homo_sapiens 0 311
ENST00000567933 COQ9-012 protein_coding Homo_sapiens 0 329
ENST00000568790 COQ9-003 retained_intron Homo_sapiens 0 643

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