C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coenzyme Q9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262507 COQ9-001 ENSG00000088682 9606 + 16:57447437-57461275 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000262507
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000262507 13.206±0.00 21.852±0.00 5.554±0.00 14.493±7.12 23.633±0.00 17.902±8.57 30.188±19.34 21.604±15.16 16.971±9.67 29.520±2.93 18.057±9.25 19.938±4.79 31.614±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZF CIL_0003ZF_0001 CGP 16:57404767-57447528
CIL_0003ZC CIL_0003ZC_0001 CGP 16:57428169-57461275
CIL_0003ZD CIL_0003ZD_0001 CGP 16:57447425-57472010

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005739 IDA mitochondrion
GO:0006120 IEA mitochondrial electron transport, NADH to ubiquinone
GO:0006744 IEA ubiquinone biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034234 Coq9-001 protein_coding Mus_musculus 0 1245
ENSMUST00000159424 Coq9-002 retained_intron Mus_musculus 0 638
ENSMUST00000159638 Coq9-005 retained_intron Mus_musculus 0 617
ENSMUST00000159871 Coq9-004 protein_coding Mus_musculus 0 616
ENSMUST00000160364 Coq9-006 retained_intron Mus_musculus 0 305
ENSMUST00000160779 Coq9-008 processed_transcript Mus_musculus 0 300
ENSMUST00000160998 Coq9-003 retained_intron Mus_musculus 0 213

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