C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | syndecan 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000159821  |
Sdc1-005 |
ENSMUSG00000020592 |
10090 | + |
12:8771324-8789883  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000254351
|
SDC1-001 | protein_coding | Homo_sapiens | 0 | 287 |
|
ENST00000381150
|
SDC1-201 | protein_coding | Homo_sapiens | 0 | 259 |
|
ENST00000403076
|
SDC1-002 | protein_coding | Homo_sapiens | 0 | 274 |
|
ENST00000429035
|
SDC1-005 | protein_coding | Homo_sapiens | 2e-18 | 97 |
|
ENST00000447124
|
SDC1-004 | nonsense_mediated_decay | Homo_sapiens | 1e-19 | 100 |
|
ENST00000482879
|
SDC1-006 | processed_transcript | Homo_sapiens | 1e-19 | 100 |
