C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 150
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160472 Ccdc150-003 ENSMUSG00000025983 10090 + 1:54250722-54368470 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverLungMuscleOvaryENSMUST00000160472
Transcript ID Brain Liver Lung Muscle Ovary
ENSMUST00000160472 0.029±0.01 0.031±0.01 0.021±0.00 0.007±0.00 0.151±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KC CIL_0002KC_0002 CGP 1:53806876-54368727
CIL_0002KF CIL_0002KF_0002 CGP 1:54250683-54438971

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389175 CCDC150-001 protein_coding Homo_sapiens 0 1441
ENST00000409270 CCDC150-006 protein_coding Homo_sapiens 0 1173
ENST00000424427 CCDC150-005 nonsense_mediated_decay Homo_sapiens 0 523
ENST00000431807 CCDC150-020 nonsense_mediated_decay Homo_sapiens 0 1173
ENST00000448409 CCDC150-008 nonsense_mediated_decay Homo_sapiens 0 841
ENST00000461243 CCDC150-019 processed_transcript Homo_sapiens 1e-20 104
ENST00000461825 CCDC150-011 processed_transcript Homo_sapiens 0 327
ENST00000463826 CCDC150-007 retained_intron Homo_sapiens 0 564
ENST00000465092 CCDC150-012 processed_transcript Homo_sapiens 0 276
ENST00000469429 CCDC150-013 processed_transcript Homo_sapiens 0 252
ENST00000487663 CCDC150-009 processed_transcript Homo_sapiens 0 736
ENST00000494389 CCDC150-010 processed_transcript Homo_sapiens 0 841

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