C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Alstrom syndrome 1, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160606 Alms1-ps2-002 ENSMUSG00000090098 10090 + 6:85792117-85804057 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMuscleOvaryPlacentaENSMUST00000160606
Transcript ID Liver Muscle Ovary Placenta
ENSMUST00000160606 0.012±0.00 0.036±0.00 0.080±0.04 0.010±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000428767 ALMS1P-001 transcribed_unprocessed_pseudogene Homo_sapiens 1e-16 92
ENST00000450720 ALMS1P-002 processed_transcript Homo_sapiens 4e-19 100

Loading