C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | heparan sulfate 2-O-sulfotransferase 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000160690  |
Hs2st1-002 |
ENSMUSG00000040151 |
10090 | - |
3:144453963-144569881  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008DM | CIL_0008DM_0002 | VISTA | 3:143873688-144475123 |
| CIL_00093Z | CIL_00093Z_0002 | VISTA | 3:143873814-144474949 |
| CIL_0008FW | CIL_0008FW_0002 | VISTA | 3:143894509-144496427 |
| CIL_0008P2 | CIL_0008P2_0002 | VISTA | 3:143903013-144504545 |
| CIL_0000F7 | CIL_0000F7_0002 | CGP | 3:144188530-144570181 |
| CIL_0000UJ | CIL_0000UJ_0002 | CGP | 3:144431103-144597680 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004394 | IMP | heparan sulfate 2-O-sulfotransferase activity |
| GO:0015014 | IMP | heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process |
| GO:0016021 | IEA | integral component of membrane |
| GO:0030202 | IMP | heparin metabolic process |
| GO:0060676 | IMP | ureteric bud formation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000370548
|
RP5-1052I5.2-001 | protein_coding | Homo_sapiens | 0 | 383 |
|
ENST00000370550
|
HS2ST1-001 | protein_coding | Homo_sapiens | 0 | 383 |
|
ENST00000370551
|
HS2ST1-002 | protein_coding | Homo_sapiens | 0 | 383 |
|
ENST00000591456
|
HS2ST1-003 | protein_coding | Homo_sapiens | 0 | 381 |
