C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000F7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000054749-ENSDARG00000062008 CGP 7955 6:25668492-25815149
GeneTranscriptPositionBiotype
ENSDARG00000054749 (lmo4b)
LIM domain only 4b 		ENSDART00000076997 (lmo4b-001) 25668492-25687604 protein_coding
ENSDART00000148748 (lmo4b-002) 25669249-25687626 protein_coding
ENSDARG00000062008 (hs2st1b)
heparan sulfate 2-O-sulfotransferase 1b 		ENSDART00000089121 (hs2st1b-201) 25798721-25815149 protein_coding
ENSDART00000154568 (hs2st1b-001) 25798718-25815142 protein_coding
ENSDART00000157181 (hs2st1b-002) 25800759-25815140 protein_coding
CIL_0000F7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028266-ENSMUSG00000040151 CGP 10090 3:144188530-144570181
GeneTranscriptPositionBiotype
ENSMUSG00000028266 (Lmo4)
LIM domain only 4 		ENSMUST00000120539 (Lmo4-001) 144188530-144205220 protein_coding
ENSMUST00000121112 (Lmo4-003) 144188632-144202332 protein_coding
ENSMUST00000121796 (Lmo4-002) 144188530-144202317 protein_coding
ENSMUST00000124891 (Lmo4-006) 144201623-144202300 retained_intron
ENSMUST00000134961 (Lmo4-004) 144200783-144205180 retained_intron
ENSMUST00000148128 (Lmo4-005) 144189062-144194818 retained_intron
ENSMUSG00000040151 (Hs2st1)
heparan sulfate 2-O-sulfotransferase 1 		ENSMUST00000043325 (Hs2st1-001) 144431103-144570181 protein_coding
ENSMUST00000160690 (Hs2st1-002) 144453963-144569881 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000F7_0001ENSDARG00000054749ENSDART00000076997ENSDART00000148748ENSDARG00000062008ENSDART00000089121ENSDART00000154568ENSDART00000157181CIL_0000F7_0002ENSMUSG00000028266ENSMUST00000120539ENSMUST00000121112ENSMUST00000121796ENSMUST00000124891ENSMUST00000134961ENSMUST00000148128ENSMUSG00000040151ENSMUST00000043325ENSMUST00000160690
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000F7_0001ENSDARG00000054749ENSDART00000076997ENSDART00000148748ENSDARG00000062008ENSDART00000089121ENSDART00000154568ENSDART00000157181CIL_0000F7_0002ENSMUSG00000028266ENSMUST00000120539ENSMUST00000121112ENSMUST00000121796ENSMUST00000148128ENSMUSG00000040151ENSMUST00000043325
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000054749 ENSDART00000076997 N/A N/A N/A 33.793±7.10 N/A N/A 1.045±0.00 2.069±0.00 0.169±0.00 N/A 2.540±0.00 N/A N/A N/A
ENSDART00000148748 N/A N/A N/A 8.124±0.00 N/A N/A 0.555±0.23 N/A N/A N/A 0.707±0.00 N/A N/A N/A
ENSDARG00000062008 ENSDART00000089121 N/A N/A N/A N/A N/A N/A 3.023±0.02 1.424±0.00 N/A N/A 0.085±0.00 N/A N/A N/A
ENSDART00000154568 N/A N/A N/A N/A N/A N/A N/A N/A 0.212±0.00 N/A 0.338±0.00 N/A N/A N/A
ENSDART00000157181 N/A N/A N/A 7.146±0.00 N/A N/A 1.808±0.00 N/A N/A N/A 0.754±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028266 ENSMUST00000120539 19.553±7.55 35.040±6.58 54.415±0.00 19.649±6.43 15.750±5.84 11.277±1.47 3.536±1.00 13.602±4.02 5.800±5.18 12.496±1.22 5.350±1.42 19.151±6.16 4.006±3.38 1.431±0.76
ENSMUST00000121112 N/A N/A N/A 6.490±0.00 13.199±0.00 N/A 3.361±0.00 N/A N/A 5.887±0.73 3.039±0.45 3.776±2.06 1.043±0.17 N/A
ENSMUST00000121796 48.538±22.92 46.103±9.65 57.334±0.00 16.284±8.05 35.879±5.57 13.500±3.35 12.799±2.44 40.969±4.19 6.121±1.39 30.711±5.64 3.325±1.92 24.258±6.42 4.531±1.97 4.126±1.88
ENSMUST00000124891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148128 N/A N/A N/A N/A 10.593±0.00 N/A N/A N/A N/A N/A N/A 12.248±0.15 3.990±0.00 N/A
ENSMUSG00000040151 ENSMUST00000043325 4.672±1.75 3.525±1.50 4.586±1.00 7.626±2.66 2.973±0.64 3.337±0.75 1.304±0.59 2.839±0.97 1.626±0.47 19.104±8.46 1.713±0.40 6.694±1.82 4.845±1.81 2.018±0.84
ENSMUST00000160690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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