C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000UJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062078-ENSDARG00000074940 CGP 7955 2:23147745-23192145
GeneTranscriptPositionBiotype
ENSDARG00000062078 (hs2st1a)
heparan sulfate 2-O-sulfotransferase 1a 		ENSDART00000089327 (hs2st1a-001) 23147745-23181556 protein_coding
ENSDART00000147829 (hs2st1a-002) 23154934-23181558 processed_transcript
ENSDARG00000074940 (sep15)
selenoprotein 15 		ENSDART00000137906 (sep15-002) 23182132-23191983 retained_intron
ENSDART00000148208 (sep15-001) 23182115-23192145 protein_coding
CIL_0000UJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040151-ENSMUSG00000037072 CGP 10090 3:144431103-144597680
GeneTranscriptPositionBiotype
ENSMUSG00000037072 (Sep15)
selenoprotein 		ENSMUST00000082437 (Sep15-001) 144570426-144597680 protein_coding
ENSMUST00000106211 (Sep15-002) 144570693-144597661 protein_coding
ENSMUST00000144859 (Sep15-003) 144570304-144597257 processed_transcript
ENSMUST00000151086 (Sep15-004) 144577652-144595432 retained_intron
ENSMUSG00000040151 (Hs2st1)
heparan sulfate 2-O-sulfotransferase 1 		ENSMUST00000043325 (Hs2st1-001) 144431103-144570181 protein_coding
ENSMUST00000160690 (Hs2st1-002) 144453963-144569881 nonsense_mediated_decay
ENSMUSG00000064960 (Gm24406)
predicted gene, 24406 		ENSMUST00000083026 (Gm24406-201) 144586825-144586952 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000UJ_0001ENSDARG00000062078ENSDART00000089327ENSDART00000147829ENSDARG00000074940ENSDART00000137906ENSDART00000148208CIL_0000UJ_0002ENSMUSG00000037072ENSMUST00000082437ENSMUST00000106211ENSMUST00000144859ENSMUST00000151086ENSMUSG00000040151ENSMUST00000043325ENSMUST00000160690ENSMUSG00000064960ENSMUST00000083026
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000UJ_0001ENSDARG00000062078ENSDART00000089327ENSDARG00000074940ENSDART00000137906ENSDART00000148208CIL_0000UJ_0002ENSMUSG00000037072ENSMUST00000082437ENSMUST00000106211ENSMUST00000144859ENSMUSG00000040151ENSMUST00000043325ENSMUSG00000064960ENSMUST00000083026
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000062078 ENSDART00000089327 N/A N/A N/A 2.464±1.69 N/A N/A 2.252±0.58 1.464±0.39 0.138±0.00 N/A 3.296±0.00 N/A N/A N/A
ENSDART00000147829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000074940 ENSDART00000137906 N/A N/A N/A 29.532±0.00 N/A N/A 46.656±3.25 51.751±1.49 1.629±0.00 N/A 2.438±0.00 N/A N/A N/A
ENSDART00000148208 N/A N/A N/A 22.073±13.38 N/A N/A 51.166±15.13 48.641±0.00 4.141±0.00 N/A 13.266±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037072 ENSMUST00000082437 N/A N/A 167.473±16.03 31.870±22.57 6.854±0.00 15.265±1.20 8.440±3.65 28.069±1.05 67.351±40.40 61.632±5.81 37.417±3.40 84.202±9.87 82.273±60.10 21.638±16.67
ENSMUST00000106211 58.921±3.42 324.146±170.48 N/A 32.930±19.68 101.025±61.05 192.844±27.06 33.068±8.94 99.429±38.68 106.345±66.20 177.900±52.36 N/A 171.564±124.66 35.109±21.71 26.961±2.96
ENSMUST00000144859 56.386±11.48 605.922±316.50 N/A 31.895±11.18 44.565±12.49 N/A 20.983±8.09 41.389±0.00 38.048±7.62 N/A 12.421±1.88 48.853±18.40 49.152±17.68 18.436±4.08
ENSMUST00000151086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040151 ENSMUST00000043325 4.672±1.75 3.525±1.50 4.586±1.00 7.626±2.66 2.973±0.64 3.337±0.75 1.304±0.59 2.839±0.97 1.626±0.47 19.104±8.46 1.713±0.40 6.694±1.82 4.845±1.81 2.018±0.84
ENSMUST00000160690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000064960 ENSMUST00000083026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.477±0.00 5.323±0.00 N/A N/A

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