C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gap junction protein, beta 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160703 Gjb6-002 ENSMUSG00000040055 10090 - 14:57124282-57133281 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000160703
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000160703 0.167±0.07 0.051±0.03 0.059±0.00 1.523±0.38 0.043±0.05 1.654±0.29 0.265±0.17 0.103±0.02 0.127±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SL CIL_0003SL_0002 CGP 14:57123303-57398483

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005921 IDA gap junction
GO:0005922 IEA connexon complex
GO:0007154 IEA cell communication
GO:0007605 IMP sensory perception of sound
GO:0016021 IEA integral component of membrane
GO:0042471 IMP ear morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000241124 GJB6-001 protein_coding Homo_sapiens 0 577
ENST00000356192 GJB6-004 protein_coding Homo_sapiens 0 577
ENST00000400065 GJB6-002 protein_coding Homo_sapiens 0 577
ENST00000400066 GJB6-003 protein_coding Homo_sapiens 0 577

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