C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histamine receptor H1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160780 Hrh1-005 ENSMUSG00000053004 10090 + 6:114458519-114482468 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000160780
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000160780 0.537±0.11 0.415±0.06 0.317±0.04 1.158±1.45 0.602±0.15 2.336±0.62 0.080±0.06 0.139±0.05 0.030±0.01 0.241±0.05 0.098±0.04 0.312±0.16 0.049±0.03 0.156±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061I CIL_00061I_0002 CGP 6:114282635-114483296
CIL_00061H CIL_00061H_0002 CGP 6:114397936-114860614

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004969 ISS histamine receptor activity
GO:0005887 ISS integral component of plasma membrane
GO:0007186 ISS G-protein coupled receptor signaling pathway
GO:0007613 IMP memory
GO:0008542 IMP visual learning
GO:0015085 ISO calcium ion transmembrane transporter activity
GO:0043114 IEA regulation of vascular permeability
GO:0045907 IEA positive regulation of vasoconstriction
GO:0048167 IMP regulation of synaptic plasticity
GO:0048245 IEA eosinophil chemotaxis
GO:0048511 IEA rhythmic process
GO:0070509 ISO calcium ion import
GO:0070588 ISO calcium ion transmembrane transport
GO:0071420 ISO:ISS cellular response to histamine
GO:0071421 ISO manganese ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397056 HRH1-001 protein_coding Homo_sapiens 0 1218
ENST00000431010 HRH1-003 protein_coding Homo_sapiens 0 1216
ENST00000438284 HRH1-002 protein_coding Homo_sapiens 0 1218

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