C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9727
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161387 Gm9727-001 ENSMUSG00000089628 10090 - 5:107478526-107479080 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungOvaryPlacentaTestisENSMUST00000161387
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENSMUST00000161387 0.250±0.14 0.287±0.09 0.064±0.01 0.147±0.11 0.497±0.42 0.240±0.10 0.101±0.03 0.145±0.10 0.095±0.00 0.655±0.65 0.018±0.01 0.503±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DI CIL_0008DI_0002 VISTA 5:106921760-107524214
CIL_0008YV CIL_0008YV_0002 VISTA 5:106950899-107552442
CIL_0005ZT CIL_0005ZT_0002 CGP 5:107437997-107580596

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293406 LSM12-201 protein_coding Homo_sapiens 0 893
ENST00000411836 LSM12P1-001 processed_pseudogene Homo_sapiens 0 893
ENST00000585388 LSM12-002 protein_coding Homo_sapiens 0 749
ENST00000590563 LSM12-003 retained_intron Homo_sapiens 0 536
ENST00000591247 LSM12-001 protein_coding Homo_sapiens 0 893

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