C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 6822
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161440 Gm6822-001 ENSMUSG00000061863 10090 - 1:55160747-55161053 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161440
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161440 0.285±0.00 0.265±0.11 0.304±0.02 0.375±0.00 0.217±0.01 0.213±0.00 0.479±0.23 0.279±0.01 0.261±0.00 0.519±0.02 0.277±0.14 0.501±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X7 CIL_0007X7_0002 VISTA 1:54604981-55208576
CIL_00042C CIL_00042C_0003 CGP 1:55131231-55226782

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300688 ATP5L-001 protein_coding Homo_sapiens 0 337
ENST00000434169 ATP5LP4-001 processed_pseudogene Homo_sapiens 0 220
ENST00000440646 ATP5LP2-001 processed_pseudogene Homo_sapiens 0 318
ENST00000524422 ATP5L-006 protein_coding Homo_sapiens 0 206
ENST00000527186 ATP5L-007 retained_intron Homo_sapiens 0 337
ENST00000529460 ATP5L-002 processed_transcript Homo_sapiens 0 335
ENST00000529770 ATP5L-003 processed_transcript Homo_sapiens 0 337
ENST00000529790 ATP5L-008 retained_intron Homo_sapiens 0 337
ENST00000533172 ATP5L-004 processed_transcript Homo_sapiens 7e-30 134
ENST00000534385 ATP5L-005 retained_intron Homo_sapiens 0 207
ENST00000560431 RP11-30K9.7-001 processed_pseudogene Homo_sapiens 0 196

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