C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceronephosphate O-acyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161986 Gnpat-002 ENSMUSG00000031985 10090 + 8:124863072-124886728 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLungOvaryTestisENSMUST00000161986
Transcript ID Adrenal Breast Colon Lung Ovary Testis
ENSMUST00000161986 47.183±8.30 19.986±0.00 9.027±1.32 7.075±0.00 18.079±5.20 29.500±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WK CIL_0007WK_0002 VISTA 8:124343702-124945898
CIL_0006B2 CIL_0006B2_0002 CGP 8:124839355-124890057
CIL_0006B5 CIL_0006B5_0002 CGP 8:124863033-124897705

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IDA catalytic activity
GO:0005515 IPI protein binding
GO:0005782 TAS peroxisomal matrix
GO:0007416 IMP synapse assembly
GO:0008611 TAS ether lipid biosynthetic process
GO:0016287 IDA glycerone-phosphate O-acyltransferase activity
GO:0021587 IMP cerebellum morphogenesis
GO:0030913 IMP paranodal junction assembly
GO:0042552 IMP myelination
GO:0061024 IMP membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366647 GNPAT-001 protein_coding Homo_sapiens 0 1162
ENST00000416000 GNPAT-002 protein_coding Homo_sapiens 0 1471
ENST00000436239 GNPAT-003 protein_coding Homo_sapiens 0 440
ENST00000567548 GNPATP-001 processed_pseudogene Homo_sapiens 0 318

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