C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceronephosphate O-acyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366647 GNPAT-001 ENSG00000116906 9606 + 1:231241210-231277973 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366647
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366647 1.550±0.00 2.075±0.00 0.510±0.00 3.517±1.40 14.090±0.00 4.831±0.83 4.453±1.73 2.174±1.25 2.860±1.32 3.327±0.83 7.770±1.38 7.661±4.43 9.805±4.84 17.353±12.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006B2 CIL_0006B2_0001 CGP 1:231223763-231277973
CIL_0006B5 CIL_0006B5_0001 CGP 1:231241207-231337852

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005102 IPI receptor binding
GO:0005515 IEA protein binding
GO:0005739 IEA mitochondrion
GO:0005777 IDA peroxisome
GO:0005778 IDA peroxisomal membrane
GO:0005782 TAS peroxisomal matrix
GO:0006644 TAS phospholipid metabolic process
GO:0006654 TAS phosphatidic acid biosynthetic process
GO:0007416 IEA synapse assembly
GO:0007584 IEA response to nutrient
GO:0008152 IEA metabolic process
GO:0008611 IDA ether lipid biosynthetic process
GO:0016020 IDA membrane
GO:0016287 IDA glycerone-phosphate O-acyltransferase activity
GO:0016290 IDA palmitoyl-CoA hydrolase activity
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0021587 IEA cerebellum morphogenesis
GO:0030913 IEA paranodal junction assembly
GO:0042493 IEA response to drug
GO:0042552 IEA myelination
GO:0042594 IEA response to starvation
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process
GO:0061024 IEA membrane organization
GO:0070542 IEA response to fatty acid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034466 Gnpat-001 protein_coding Mus_musculus 0 1700
ENSMUST00000161986 Gnpat-002 protein_coding Mus_musculus 0 1162
ENSMUST00000162455 Gnpat-003 retained_intron Mus_musculus 0 405
ENSMUST00000161628 Gnpat-004 retained_intron Mus_musculus 0 307
ENSMUST00000159864 Gnpat-006 retained_intron Mus_musculus 1e-20 106

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