C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162554 Ttc26-001 ENSMUSG00000056832 10090 + 6:38381469-38427647 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162554
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162554 0.701±0.20 0.225±0.04 1.378±0.16 2.562±1.68 0.307±0.00 0.735±0.35 0.137±0.08 0.927±0.33 0.261±0.06 1.644±0.72 0.392±0.14 4.690±2.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QC CIL_0002QC_0002 CGP 6:38381469-38524825

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005813 IDA centrosome
GO:0005929 IDA cilium
GO:0008594 ISO photoreceptor cell morphogenesis
GO:0030992 IDA intraciliary transport particle B
GO:0036064 IDA ciliary basal body
GO:0042073 IC intraciliary transport
GO:0042384 IMP cilium assembly
GO:0046530 ISO photoreceptor cell differentiation
GO:0072372 IDA primary cilium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000032494 ttc26-001 protein_coding Danio_rerio 0 784
ENSDART00000147985 ttc26-002 processed_transcript Danio_rerio 4e-22 111
ENST00000343187 TTC26-002 protein_coding Homo_sapiens 0 1973
ENST00000430935 TTC26-201 protein_coding Homo_sapiens 0 1975
ENST00000464848 TTC26-001 protein_coding Homo_sapiens 0 2274
ENST00000474035 TTC26-006 protein_coding Homo_sapiens 0 1009
ENST00000476296 TTC26-003 nonsense_mediated_decay Homo_sapiens 0 1777
ENST00000478836 TTC26-005 protein_coding Homo_sapiens 0 1376
ENST00000481482 TTC26-007 processed_transcript Homo_sapiens 0 1310
ENST00000495038 TTC26-004 protein_coding Homo_sapiens 0 1271

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