C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit 6, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163304 Eif3s6-ps2-201 ENSMUSG00000091697 10090 - 18:90311825-90312043 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungPlacentaTestisENSMUST00000163304
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Placenta Testis
ENSMUST00000163304 3.847±2.19 12.725±0.00 3.160±1.74 5.086±0.00 1.350±0.44 2.938±1.66 1.611±0.25 2.095±0.00 12.659±12.56 16.365±17.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000220849 EIF3E-001 protein_coding Homo_sapiens 0 326
ENST00000518100 EIF3E-006 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000518345 EIF3E-007 protein_coding Homo_sapiens 0 326
ENST00000518442 EIF3E-003 retained_intron Homo_sapiens 0 326
ENST00000519030 EIF3E-002 protein_coding Homo_sapiens 0 237
ENST00000521440 EIF3E-011 protein_coding Homo_sapiens 0 326
ENST00000521614 EIF3E-004 retained_intron Homo_sapiens 0 326
ENST00000522445 EIF3E-009 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000522887 EIF3E-005 nonsense_mediated_decay Homo_sapiens 0 326

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