C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit E
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000220849 EIF3E-001 ENSG00000104408 9606 - 8:108201743-108248765 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000220849
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000220849 60.708±0.00 59.252±0.00 8.608±0.00 19.984±3.47 52.246±4.88 80.416±48.03 22.016±4.43 34.922±5.56 32.740±12.15 54.517±15.45 31.876±22.40 131.897±40.13 39.731±16.01 63.173±13.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004T1 CIL_0004T1_0002 CGP 8:107899316-108435333
CIL_0004T2 CIL_0004T2_0002 CGP 8:108201216-108486918

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 IMP nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000785 NAS chromatin
GO:0001731 IEA formation of translation preinitiation complex
GO:0003743 IEA:IC translation initiation factor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 NAS nucleoplasm
GO:0005737 IDA:IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005852 IEA:NAS eukaryotic translation initiation factor 3 complex
GO:0006412 TAS translation
GO:0006413 IC translational initiation
GO:0006446 IEA:NAS regulation of translational initiation
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0016605 IEA:IDA PML body
GO:0033290 IEA eukaryotic 48S preinitiation complex
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0045947 NAS negative regulation of translational initiation
GO:0047485 IPI protein N-terminus binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022960 Eif3e-201 protein_coding Mus_musculus 0 1831
ENSMUST00000163304 Eif3s6-ps2-201 processed_pseudogene Mus_musculus 0 326

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