C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class I, type 8B, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163354 Atp8b2-003 ENSMUSG00000060671 10090 - 3:89939489-89953365 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainLiverLungMuscleOvaryPlacentaTestisENSMUST00000163354
Transcript ID Adrenal Bladder Brain Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000163354 3.708±0.00 2.526±0.04 3.405±0.92 0.394±0.17 2.456±0.00 0.358±0.09 5.346±1.63 2.452±0.62 1.137±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064Q CIL_00064Q_0002 CGP 3:89869324-89963508

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284509 ATP8B4-201 protein_coding Homo_sapiens 0 459
ENST00000368487 ATP8B2-003 protein_coding Homo_sapiens 0 289
ENST00000368489 ATP8B2-001 protein_coding Homo_sapiens 0 3605
ENST00000426445 ATP8B2-002 processed_transcript Homo_sapiens 0 547
ENST00000505882 ATP8B2-006 retained_intron Homo_sapiens 0 754
ENST00000557955 ATP8B4-003 nonsense_mediated_decay Homo_sapiens 0 459
ENST00000558906 ATP8B4-002 nonsense_mediated_decay Homo_sapiens 0 459
ENST00000559726 ATP8B4-007 nonsense_mediated_decay Homo_sapiens 0 459
ENST00000559829 ATP8B4-001 protein_coding Homo_sapiens 0 459
ENST00000559998 ATP8B4-012 retained_intron Homo_sapiens 4e-35 152
ENST00000560161 ATP8B4-017 processed_transcript Homo_sapiens 0 231
ENST00000560479 ATP8B4-005 protein_coding Homo_sapiens 0 459
ENST00000561385 ATP8B4-004 retained_intron Homo_sapiens 0 231

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