C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: threonyl-tRNA synthetase 2, mitochondrial (putative)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163530 Tars2-204 ENSMUSG00000028107 10090 - 3:95739976-95754977 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLiverLungOvaryPlacentaENSMUST00000163530
Transcript ID Adrenal Brain Breast Colon Liver Lung Ovary Placenta
ENSMUST00000163530 5.082±0.71 7.326±0.00 3.228±0.00 3.292±1.13 2.312±0.69 2.054±0.06 3.796±0.58 11.401±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053N CIL_00053N_0002 CGP 3:95739976-95818953

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004829 IEA threonine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006435 IEA threonyl-tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369051 TARS2-012 nonsense_mediated_decay Homo_sapiens 0 1107
ENST00000369054 TARS2-010 protein_coding Homo_sapiens 0 1109
ENST00000369064 TARS2-001 protein_coding Homo_sapiens 0 1489
ENST00000438568 TARS2-201 protein_coding Homo_sapiens 0 1107
ENST00000462578 TARS2-004 retained_intron Homo_sapiens 0 390
ENST00000463555 TARS2-006 processed_transcript Homo_sapiens 0 634
ENST00000467982 TARS2-008 nonsense_mediated_decay Homo_sapiens 0 915
ENST00000480070 TARS2-005 processed_transcript Homo_sapiens 0 634
ENST00000483046 TARS2-009 processed_transcript Homo_sapiens 0 268
ENST00000606933 TARS2-013 protein_coding Homo_sapiens 0 1107

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