C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenomatosis polyposis coli down-regulated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163716 Apcdd1-202 ENSMUSG00000071847 10090 + 18:62922329-62952464 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000163716
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000163716 35.733±16.60 8.648±1.72 17.218±10.50 28.244±3.86 1.525±0.60 1.141±0.36 2.176±0.85 0.058±0.05 3.444±1.60 0.251±0.00 20.081±5.53 0.303±0.00 0.647±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021J CIL_00021J_0002 CGP 18:62922327-62999450

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005887 ISS integral component of plasma membrane
GO:0016055 IEA Wnt signaling pathway
GO:0017147 ISS Wnt-protein binding
GO:0030178 ISS negative regulation of Wnt signaling pathway
GO:0043615 IDA astrocyte cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355285 APCDD1-001 protein_coding Homo_sapiens 0 1666
ENST00000423585 APCDD1-002 nonsense_mediated_decay Homo_sapiens 0 782
ENST00000579685 APCDD1-005 nonsense_mediated_decay Homo_sapiens 0 656

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