C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydrocarboxylic acid receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164267 Hcar1-001 ENSMUSG00000049241 10090 - 5:123876736-123880020 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164267
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164267 27.285±8.63 14.613±5.17 4.197±0.20 0.135±0.04 31.508±3.68 2.679±0.21 0.965±0.38 5.690±0.72 0.058±0.04 1.280±0.53 0.123±0.11 3.645±0.83 0.577±0.49 0.061±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006Q CIL_00006Q_0004 CGP 5:123863570-123880020
CIL_00084E CIL_00084E_0002 VISTA 5:123871507-124476501
CIL_0002PG CIL_0002PG_0002 CGP 5:123876736-123928832

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0005886 IEA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0032355 IEA response to estradiol

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000432564 HCAR1-001 protein_coding Homo_sapiens 0 898

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