C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 98, member C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164589 Fam98c-201 ENSMUSG00000030590 10090 - 7:29152511-29156210 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164589
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164589 7.487±0.43 7.681±1.34 16.809±3.32 5.757±1.38 11.470±2.96 26.853±5.66 4.462±1.31 8.852±0.68 3.059±0.91 10.628±3.22 7.471±1.30 8.313±1.50 2.779±0.22 62.619±16.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UX CIL_0006UX_0002 CGP 7:29003340-29153961

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252530 FAM98C-001 protein_coding Homo_sapiens 0 704
ENST00000343358 FAM98C-004 protein_coding Homo_sapiens 0 254
ENST00000586372 FAM98C-005 retained_intron Homo_sapiens 0 473
ENST00000588262 FAM98C-002 protein_coding Homo_sapiens 0 200
ENST00000588348 FAM98C-003 retained_intron Homo_sapiens 0 475
ENST00000589029 FAM98C-008 nonsense_mediated_decay Homo_sapiens 1e-29 134
ENST00000589408 FAM98C-007 protein_coding Homo_sapiens 0 228

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