C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-Coenzyme A oxidase 2, branched chain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164598 Acox2-001 ENSMUSG00000021751 10090 - 14:8225511-8259353 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000164598
Transcript ID Adipose Adrenal Bladder Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000164598 0.142±0.00 0.146±0.00 0.020±0.00 0.303±0.21 0.212±0.04 18.414±3.17 14.723±11.05 1.667±0.04 0.027±0.01 1.125±0.30 1.263±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AH CIL_0002AH_0002 CGP 14:8214148-8259353
CIL_0002AI CIL_0002AI_0002 CGP 14:8225511-8318023

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003995 IEA acyl-CoA dehydrogenase activity
GO:0003997 IEA acyl-CoA oxidase activity
GO:0005102 IEA receptor binding
GO:0006635 IEA fatty acid beta-oxidation
GO:0033791 IEA 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302819 ACOX2-001 protein_coding Homo_sapiens 0 1570
ENST00000459701 ACOX2-002 protein_coding Homo_sapiens 0 1005
ENST00000460921 ACOX2-014 nonsense_mediated_decay Homo_sapiens 4.06377e-44 182
ENST00000466810 ACOX2-009 retained_intron Homo_sapiens 0 291
ENST00000467738 ACOX2-012 retained_intron Homo_sapiens 0 793
ENST00000481527 ACOX2-013 processed_transcript Homo_sapiens 0 507
ENST00000489472 ACOX2-010 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000492530 ACOX2-008 nonsense_mediated_decay Homo_sapiens 0 396

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