C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline rich 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164957 Prr13-004 ENSMUSG00000023048 10090 + 15:102459202-102462782 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164957
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164957 41.464±2.34 96.600±10.67 43.979±6.34 21.860±11.72 59.794±19.44 250.972±46.43 16.566±2.59 56.662±8.63 48.742±25.03 87.742±2.57 5.501±1.91 34.678±10.38 45.686±22.66 7.486±1.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0002 VISTA 15:102394217-102994945

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379786 PRR13-003 protein_coding Homo_sapiens 0 244
ENST00000429243 PRR13-001 protein_coding Homo_sapiens 0 339
ENST00000546581 PRR13-008 protein_coding Homo_sapiens 2e-34 150
ENST00000547368 PRR13-011 protein_coding Homo_sapiens 0 339
ENST00000549068 PRR13-014 protein_coding Homo_sapiens 0 222
ENST00000549135 PRR13-007 protein_coding Homo_sapiens 0 339
ENST00000549581 PRR13-013 protein_coding Homo_sapiens 0 244
ENST00000549924 PRR13-009 protein_coding Homo_sapiens 0 300
ENST00000551003 PRR13-002 protein_coding Homo_sapiens 0 265
ENST00000577786 PRR13P4-001 processed_pseudogene Homo_sapiens 0 252
ENST00000596581 PRR13P5-001 processed_pseudogene Homo_sapiens 0 265
ENST00000605538 PRR13P7-001 processed_pseudogene Homo_sapiens 3.99931e-42 176

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