Source ID |
Type |
Tax ID |
Position |
hs338 |
VISTA |
9606 |
12:53396852-53997557 |
Gene | Transcript | Position | Biotype |
ENSG00000123364 (HOXC13)
homeobox C13
|
ENST00000243056 (HOXC13-001)
|
53938765-53946544 |
protein_coding |
ENSG00000123388 (HOXC11)
homeobox C11
|
ENST00000243082 (HOXC11-002)
|
53973128-53976419 |
protein_coding |
ENST00000546378 (HOXC11-001)
|
53973126-53977643 |
protein_coding |
ENSG00000123407 (HOXC12)
homeobox C12
|
ENST00000243103 (HOXC12-001)
|
53954834-53958956 |
protein_coding |
ENSG00000135409 (AMHR2)
anti-Mullerian hormone receptor, type II
|
ENST00000257863 (AMHR2-001)
|
53423855-53431534 |
protein_coding |
ENST00000379791 (AMHR2-002)
|
53423935-53431473 |
protein_coding |
ENST00000548303 (AMHR2-006)
|
53425076-53428924 |
retained_intron |
ENST00000550311 (AMHR2-003)
|
53423866-53431473 |
protein_coding |
ENST00000550839 (AMHR2-007)
|
53425116-53430283 |
protein_coding |
ENST00000552233 (AMHR2-004)
|
53425082-53431264 |
retained_intron |
ENST00000553037 (AMHR2-005)
|
53424278-53425123 |
retained_intron |
ENSG00000139546 (TARBP2)
TAR (HIV-1) RNA binding protein 2
|
ENST00000266987 (TARBP2-001)
|
53500926-53506431 |
protein_coding |
ENST00000394357 (TARBP2-009)
|
53501619-53506412 |
protein_coding |
ENST00000456234 (TARBP2-006)
|
53500953-53506424 |
protein_coding |
ENST00000546763 (TARBP2-018)
|
53503714-53504787 |
retained_intron |
ENST00000546889 (TARBP2-003)
|
53501305-53502920 |
retained_intron |
ENST00000547064 (TARBP2-015)
|
53501366-53505793 |
nonsense_mediated_decay |
ENST00000547388 (TARBP2-010)
|
53501332-53503472 |
retained_intron |
ENST00000547541 (TARBP2-013)
|
53503474-53504719 |
retained_intron |
ENST00000548971 (TARBP2-005)
|
53501306-53506399 |
nonsense_mediated_decay |
ENST00000549028 (TARBP2-020)
|
53501599-53503549 |
processed_transcript |
ENST00000549572 (TARBP2-007)
|
53501604-53506423 |
nonsense_mediated_decay |
ENST00000549610 (TARBP2-002)
|
53501302-53504395 |
retained_intron |
ENST00000549679 (TARBP2-008)
|
53501605-53506396 |
nonsense_mediated_decay |
ENST00000550147 (TARBP2-004)
|
53500921-53506431 |
nonsense_mediated_decay |
ENST00000550407 (TARBP2-016)
|
53502051-53506396 |
protein_coding |
ENST00000551157 (TARBP2-017)
|
53502603-53505731 |
retained_intron |
ENST00000551741 (TARBP2-022)
|
53501591-53505851 |
nonsense_mediated_decay |
ENST00000552650 (TARBP2-012)
|
53501350-53503698 |
retained_intron |
ENST00000552817 (TARBP2-011)
|
53501597-53505686 |
protein_coding |
ENST00000552857 (TARBP2-021)
|
53501274-53506229 |
protein_coding |
ENSG00000139625 (MAP3K12)
mitogen-activated protein kinase kinase kinase 12
|
ENST00000267079 (MAP3K12-004)
|
53479669-53499615 |
protein_coding |
ENST00000547020 (MAP3K12-006)
|
53480490-53486728 |
retained_intron |
ENST00000547035 (MAP3K12-005)
|
53481122-53493866 |
protein_coding |
ENST00000547151 (MAP3K12-011)
|
53486443-53499457 |
processed_transcript |
ENST00000547488 (MAP3K12-002)
|
53481121-53499456 |
protein_coding |
ENST00000547803 (MAP3K12-012)
|
53486985-53493070 |
retained_intron |
ENST00000548565 (MAP3K12-007)
|
53487315-53500063 |
protein_coding |
ENST00000548690 (MAP3K12-008)
|
53485036-53485707 |
retained_intron |
ENST00000551511 (MAP3K12-009)
|
53481122-53482587 |
retained_intron |
ENST00000551895 (MAP3K12-010)
|
53486847-53499458 |
retained_intron |
ENST00000552365 (MAP3K12-001)
|
53481182-53487909 |
nonsense_mediated_decay |
ENSG00000170653 (ATF7)
activating transcription factor 7
|
ENST00000420353 (ATF7-001)
|
53512059-53626407 |
protein_coding |
ENST00000456903 (ATF7-006)
|
53513442-53626000 |
protein_coding |
ENST00000546661 (ATF7-003)
|
53516649-53524976 |
processed_transcript |
ENST00000548118 (ATF7-009)
|
53542887-53625996 |
protein_coding |
ENST00000548446 (ATF7-007)
|
53507856-53626370 |
protein_coding |
ENST00000550373 (ATF7-008)
|
53543091-53543951 |
processed_transcript |
ENST00000551087 (ATF7-004)
|
53515781-53523269 |
processed_transcript |
ENST00000551480 (ATF7-005)
|
53534542-53625979 |
protein_coding |
ENST00000588078 (ATF7-011)
|
53534606-53625971 |
protein_coding |
ENST00000588232 (ATF7-010)
|
53534540-53626363 |
protein_coding |
ENST00000589726 (ATF7-013)
|
53600752-53626387 |
retained_intron |
ENST00000591397 (ATF7-002)
|
53542887-53626410 |
protein_coding |
ENSG00000180806 (HOXC9)
homeobox C9
|
ENST00000303450 (HOXC9-001)
|
54000119-54003337 |
protein_coding |
ENST00000504557 (HOXC9-003)
|
53994895-54002888 |
processed_transcript |
ENST00000508190 (HOXC9-002)
|
53995509-54003298 |
protein_coding |
ENSG00000180818 (HOXC10)
homeobox C10
|
ENST00000303460 (HOXC10-001)
|
53985186-53990279 |
protein_coding |
ENST00000511575 (HOXC10-003)
|
53986132-53989993 |
processed_transcript |
ENST00000513413 (HOXC10-005)
|
53986430-53989710 |
processed_transcript |
ENST00000514415 (HOXC10-004)
|
53986338-53989675 |
processed_transcript |
ENST00000515593 (HOXC10-002)
|
53985065-53985977 |
protein_coding |
ENSG00000185591 (SP1)
Sp1 transcription factor
|
ENST00000327443 (SP1-001)
|
53380194-53411630 |
protein_coding |
ENST00000426431 (SP1-002)
|
53380639-53416446 |
protein_coding |
ENST00000548560 (SP1-004)
|
53381302-53382658 |
protein_coding |
ENST00000551969 (SP1-003)
|
53380176-53382577 |
protein_coding |
ENSG00000197111 (PCBP2)
poly(rC) binding protein 2
|
ENST00000359282 (PCBP2-008)
|
53452102-53479826 |
protein_coding |
ENST00000359462 (PCBP2-007)
|
53452129-53479832 |
protein_coding |
ENST00000437231 (PCBP2-201)
|
53452102-53481161 |
protein_coding |
ENST00000439930 (PCBP2-027)
|
53454779-53479618 |
protein_coding |
ENST00000447282 (PCBP2-202)
|
53452102-53481161 |
protein_coding |
ENST00000455667 (PCBP2-006)
|
53454737-53481162 |
protein_coding |
ENST00000546463 (PCBP2-028)
|
53452325-53479683 |
protein_coding |
ENST00000546652 (PCBP2-025)
|
53454810-53467285 |
nonsense_mediated_decay |
ENST00000547048 (PCBP2-010)
|
53467723-53479821 |
retained_intron |
ENST00000547859 (PCBP2-013)
|
53461136-53480807 |
protein_coding |
ENST00000547987 (PCBP2-020)
|
53459385-53467666 |
retained_intron |
ENST00000548190 (PCBP2-014)
|
53455909-53460686 |
retained_intron |
ENST00000548933 (PCBP2-011)
|
53454785-53479620 |
protein_coding |
ENST00000549272 (PCBP2-021)
|
53462514-53467569 |
retained_intron |
ENST00000549863 (PCBP2-002)
|
53452126-53479769 |
protein_coding |
ENST00000550192 (PCBP2-017)
|
53452817-53455950 |
protein_coding |
ENST00000550520 (PCBP2-024)
|
53452179-53461143 |
protein_coding |
ENST00000550585 (PCBP2-009)
|
53455940-53479850 |
nonsense_mediated_decay |
ENST00000550733 (PCBP2-022)
|
53468468-53479624 |
retained_intron |
ENST00000550910 (PCBP2-019)
|
53454736-53456052 |
retained_intron |
ENST00000551104 (PCBP2-018)
|
53452844-53461113 |
protein_coding |
ENST00000552296 (PCBP2-026)
|
53452368-53479614 |
protein_coding |
ENST00000552819 (PCBP2-003)
|
53454734-53479824 |
protein_coding |
ENST00000552980 (PCBP2-016)
|
53454384-53455477 |
protein_coding |
ENST00000553064 (PCBP2-023)
|
53461015-53476070 |
protein_coding |
ENST00000562264 (PCBP2-012)
|
53454860-53479683 |
protein_coding |
ENSG00000197757 (HOXC6)
homeobox C6
|
ENST00000243108 (HOXC6-001)
|
54028358-54030823 |
protein_coding |
ENST00000394331 (HOXC6-002)
|
54015897-54030733 |
protein_coding |
ENST00000504315 (HOXC6-003)
|
53990624-54028922 |
protein_coding |
ENST00000509328 (HOXC6-004)
|
53994944-54029689 |
protein_coding |
ENSG00000205352 (PRR13)
proline rich 13
|
ENST00000379786 (PRR13-003)
|
53441762-53446638 |
protein_coding |
ENST00000429243 (PRR13-001)
|
53441605-53446633 |
protein_coding |
ENST00000546581 (PRR13-008)
|
53441748-53446645 |
protein_coding |
ENST00000547368 (PRR13-011)
|
53441756-53446218 |
protein_coding |
ENST00000549068 (PRR13-014)
|
53441745-53446475 |
protein_coding |
ENST00000549135 (PRR13-007)
|
53442555-53446315 |
protein_coding |
ENST00000549581 (PRR13-013)
|
53441749-53446536 |
protein_coding |
ENST00000549740 (PRR13-012)
|
53441747-53444091 |
protein_coding |
ENST00000549924 (PRR13-009)
|
53441678-53446094 |
protein_coding |
ENST00000551003 (PRR13-002)
|
53441732-53446636 |
protein_coding |
ENST00000551365 (PRR13-006)
|
53441795-53443277 |
retained_intron |
ENST00000551945 (PRR13-010)
|
53441765-53443536 |
protein_coding |
ENST00000552846 (PRR13-004)
|
53441742-53443050 |
retained_intron |
ENSG00000228630 (HOTAIR)
HOX transcript antisense RNA
|
ENST00000424518 (HOTAIR-001)
|
53962308-53974956 |
antisense |
ENST00000425595 (HOTAIR-005)
|
53963802-53966630 |
antisense |
ENST00000439545 (HOTAIR-003)
|
53964085-53968914 |
antisense |
ENST00000453875 (HOTAIR-004)
|
53963901-53967355 |
antisense |
ENST00000455246 (HOTAIR-002)
|
53963749-53974947 |
antisense |
ENSG00000249641 (HOXC13-AS)
HOXC13 antisense RNA
|
ENST00000512916 (HOXC13-AS-001)
|
53935328-53939643 |
antisense |
ENSG00000257550 (RP11-793H13.3)
|
ENST00000548347 (RP11-793H13.3-001)
|
53513984-53517608 |
antisense |
ENSG00000260030 (RP11-686F15.2)
|
ENST00000566418 (RP11-686F15.2-001)
|
53754358-53762104 |
lincRNA |
ENSG00000260492 (CISTR)
chondrogenesis-associated transcript
|
ENST00000570015 (CISTR-001)
|
53750447-53751835 |
lincRNA |
ENSG00000270175 (RP11-793H13.11)
|
ENST00000602306 (RP11-793H13.11-001)
|
53500162-53500936 |
antisense |
ENSG00000274817 (HOTAIR_4)
HOTAIR intron conserved region 4
|
ENST00000616509 (HOTAIR_4.1-201)
|
53968002-53968178 |
misc_RNA |
ENSG00000275488 (RP11-793H13.12)
|
ENST00000617434 (RP11-793H13.12-001)
|
53574632-53576103 |
processed_pseudogene |
ENSG00000277129 (HOTAIR_5)
HOTAIR intron conserved region 5
|
ENST00000611375 (HOTAIR_5.1-201)
|
53968351-53968501 |
misc_RNA |