C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase short-chain family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165067 Acss3-201 ENSMUSG00000035948 10090 - 10:106936164-107123668 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165067
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165067 3.544±1.02 3.199±0.39 1.139±0.29 0.526±0.06 5.243±2.39 0.316±0.09 0.740±0.25 3.423±0.88 1.165±1.46 2.359±0.08 0.736±0.00 2.324±0.50 0.220±0.16 0.427±0.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003987 IEA acetate-CoA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261206 ACSS3-002 protein_coding Homo_sapiens 0 2183
ENST00000546664 ACSS3-006 nonsense_mediated_decay Homo_sapiens 0 294
ENST00000548058 ACSS3-001 protein_coding Homo_sapiens 0 2198
ENST00000548324 ACSS3-003 retained_intron Homo_sapiens 0 1378
ENST00000548387 ACSS3-004 retained_intron Homo_sapiens 0 490
ENST00000549175 ACSS3-007 protein_coding Homo_sapiens 0 350
ENST00000551745 ACSS3-005 retained_intron Homo_sapiens 0 368

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