C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase short-chain family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000548058 ACSS3-001 ENSG00000111058 9606 + 12:81077211-81261205 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000548058
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000548058 1.841±0.00 0.668±0.00 0.995±0.00 1.009±0.00 0.208±0.00 0.900±0.00 1.772±0.01 1.447±0.46 0.914±0.00 0.247±0.00 1.136±0.72 0.250±0.23 1.079±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BG CIL_0002BG_0002 CGP 12:80716912-80937925
CIL_0002BF CIL_0002BF_0002 CGP 12:80792520-81261205
CIL_000218 CIL_000218_0002 CGP 12:80936414-81759553

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0003987 IEA acetate-CoA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IEA mitochondrion
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165067 Acss3-201 protein_coding Mus_musculus 0 2198
ENSMUST00000044668 Acss3-001 protein_coding Mus_musculus 0 1526
ENSMUST00000029404 Ppfia2-201 protein_coding Mus_musculus 0 833

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