C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small integral membrane protein 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165561 Smim13-001 ENSMUSG00000091264 10090 + 13:41249860-41276574 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165561
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165561 4.562±1.26 6.119±2.10 4.385±0.04 11.871±5.56 6.996±1.11 3.243±1.02 6.463±0.64 2.566±0.39 3.781±0.69 6.041±0.47 10.027±0.90 9.368±3.40 3.648±1.04 8.498±3.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000384 CIL_000384_0002 CGP 13:41182495-41276574

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376935 SMIM13-001 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000416247 SMIM13-002 protein_coding Homo_sapiens 0 636

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