C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal-induced proliferation-associated 1 like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166429 Sipa1l1-202 ENSMUSG00000042700 10090 + 12:82170016-82451782 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryENSMUST00000166429
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000166429 2.717±1.14 2.504±0.46 0.882±0.00 0.820±0.14 2.116±0.91 2.962±0.49 0.771±0.20 2.381±0.00 2.099±0.04 4.661±1.69 4.964±1.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M7 CIL_0002M7_0002 CGP 12:81860030-82451782

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005737 IEA cytoplasm
GO:0014069 ISS postsynaptic density
GO:0030054 IEA cell junction
GO:0031532 ISS actin cytoskeleton reorganization
GO:0032317 IMP regulation of Rap GTPase activity
GO:0032861 ISS activation of Rap GTPase activity
GO:0043197 ISS dendritic spine
GO:0045211 IEA postsynaptic membrane
GO:0046875 IPI ephrin receptor binding
GO:0048013 IMP ephrin receptor signaling pathway
GO:0048167 ISS regulation of synaptic plasticity
GO:0050770 IDA regulation of axonogenesis
GO:0061001 ISS regulation of dendritic spine morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000011018 sipa1l1-201 protein_coding Danio_rerio 0 544
ENSDART00000114611 sipa1l1-001 protein_coding Danio_rerio 0 544
ENSDART00000147385 SIPA1L3-001 protein_coding Danio_rerio 0 313
ENST00000262861 SIPA1L2-201 protein_coding Homo_sapiens 0.00000000003 77
ENST00000308942 SIPA1L2-002 protein_coding Homo_sapiens 0.00000000001 77
ENST00000358550 SIPA1L1-001 protein_coding Homo_sapiens 0 6704
ENST00000366630 SIPA1L2-001 protein_coding Homo_sapiens 0.00000000003 77
ENST00000381232 SIPA1L1-003 protein_coding Homo_sapiens 0 6691
ENST00000537413 SIPA1L1-019 protein_coding Homo_sapiens 0 4638
ENST00000554874 SIPA1L1-005 processed_transcript Homo_sapiens 0 2182
ENST00000554960 SIPA1L1-004 retained_intron Homo_sapiens 0 335
ENST00000555066 SIPA1L1-006 protein_coding Homo_sapiens 0 484
ENST00000555818 SIPA1L1-002 protein_coding Homo_sapiens 0 4612
ENST00000556959 SIPA1L1-007 retained_intron Homo_sapiens 0 475

Loading