C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, K
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166468 Ptprk-201 ENSMUSG00000019889 10090 + 10:28074820-28597397 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166468
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166468 0.774±0.20 4.891±1.96 1.483±0.61 6.299±1.45 2.905±1.70 9.676±2.39 2.013±1.63 7.819±4.39 1.961±2.12 9.370±6.06 0.268±0.01 5.561±2.42 3.300±2.04 0.428±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001750 IDA photoreceptor outer segment
GO:0004725 IDA protein tyrosine phosphatase activity
GO:0005911 IEA cell-cell junction
GO:0006470 IDA protein dephosphorylation
GO:0007155 IEA cell adhesion
GO:0007165 IEA signal transduction
GO:0007179 IEA transforming growth factor beta receptor signaling pathway
GO:0008013 IEA beta-catenin binding
GO:0008285 IEA negative regulation of cell proliferation
GO:0009986 IEA cell surface
GO:0010839 IEA negative regulation of keratinocyte proliferation
GO:0016021 IEA integral component of membrane
GO:0016477 IEA cell migration
GO:0019901 IEA protein kinase binding
GO:0030336 IEA negative regulation of cell migration
GO:0030424 IDA axon
GO:0030425 IDA dendrite
GO:0031256 IEA leading edge membrane
GO:0034394 IEA protein localization to cell surface
GO:0034614 IEA cellular response to reactive oxygen species
GO:0034644 IEA cellular response to UV
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0043025 IDA neuronal cell body
GO:0045295 IEA gamma-catenin binding
GO:0045786 IEA negative regulation of cell cycle
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0048041 IEA focal adhesion assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368202 PTPRK-012 processed_transcript Homo_sapiens 0 204
ENST00000368205 PTPRK-006 processed_transcript Homo_sapiens 0 750
ENST00000368207 PTPRK-018 protein_coding Homo_sapiens 0 3066
ENST00000368210 PTPRK-004 protein_coding Homo_sapiens 0 6039
ENST00000368213 PTPRK-019 protein_coding Homo_sapiens 0 3275
ENST00000368215 PTPRK-005 protein_coding Homo_sapiens 0 3118
ENST00000368226 PTPRK-003 protein_coding Homo_sapiens 0 3308
ENST00000392449 PTPRK-008 nonsense_mediated_decay Homo_sapiens 0 510
ENST00000415046 PTPRK-009 protein_coding Homo_sapiens 0 1018
ENST00000415055 PTPRK-007 protein_coding Homo_sapiens 0 765
ENST00000429595 PTPRK-002 processed_transcript Homo_sapiens 0 484
ENST00000434424 PTPRK-013 processed_transcript Homo_sapiens 0 244
ENST00000490332 PTPRK-001 protein_coding Homo_sapiens 0 601
ENST00000495748 PTPRK-010 processed_transcript Homo_sapiens 0 828
ENST00000498284 PTPRK-011 processed_transcript Homo_sapiens 0 460
ENST00000524481 PTPRK-016 processed_transcript Homo_sapiens 0 3081
ENST00000524534 PTPRK-014 processed_transcript Homo_sapiens 0 2848
ENST00000525459 PTPRK-017 protein_coding Homo_sapiens 0 730
ENST00000531050 PTPRK-015 nonsense_mediated_decay Homo_sapiens 0 2357
ENST00000532331 PTPRK-020 protein_coding Homo_sapiens 0 5947
ENST00000532751 PTPRK-022 nonsense_mediated_decay Homo_sapiens 0 231
ENST00000618215 PTPRK-201 protein_coding Homo_sapiens 0 3308
ENST00000618924 PTPRK-202 protein_coding Homo_sapiens 0 3308
ENST00000619256 PTPRK-203 protein_coding Homo_sapiens 0 6035
ENST00000621720 PTPRK-204 protein_coding Homo_sapiens 0 510

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