C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell division cycle 34
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166603 Cdc34-202 ENSMUSG00000020307 10090 + 10:79682304-79688394 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166603
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166603 37.728±5.66 23.567±7.76 25.410±1.41 34.396±16.90 39.866±16.86 29.620±13.58 68.870±15.85 36.081±9.78 61.997±36.43 27.079±2.00 189.043±34.65 19.714±4.98 151.967±101.15 121.012±41.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0007DQ CIL_0007DQ_0002 CGP 10:79669410-79688394
CIL_0001FW CIL_0001FW_0002 CGP 10:79682195-79695261

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006513 ISS protein monoubiquitination
GO:0007049 IEA cell cycle
GO:0016881 IEA acid-amino acid ligase activity
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0070936 ISS protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000215574 CDC34-001 protein_coding Homo_sapiens 0 992
ENST00000586283 CDC34-005 protein_coding Homo_sapiens 0 822
ENST00000586788 CDC34-002 retained_intron Homo_sapiens 0 496
ENST00000593036 CDC34-006 processed_transcript Homo_sapiens 0 337
ENST00000606065 CDC34-004 protein_coding Homo_sapiens 0 658
ENST00000606400 CDC34-007 retained_intron Homo_sapiens 0 501
ENST00000607527 CDC34-003 protein_coding Homo_sapiens 0 276

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