C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, Isk-related subfamily, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166707 Kcne1-202 ENSMUSG00000039639 10090 - 16:92348432-92358874 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000166707
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000166707 0.225±0.01 0.230±0.12 0.066±0.03 0.070±0.01 0.141±0.04 9.894±2.85 7.587±0.68 0.019±0.00 0.109±0.03 0.646±0.42 0.063±0.04 0.187±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ON CIL_0008ON_0002 VISTA 16:92040534-92642015
CIL_0007SX CIL_0007SX_0002 VISTA 16:92042784-92648394
CIL_0008OM CIL_0008OM_0002 VISTA 16:92044467-92645647
CIL_0008ZS CIL_0008ZS_0002 VISTA 16:92110151-92716672
CIL_00094R CIL_00094R_0002 VISTA 16:92127453-92730131
CIL_00078G CIL_00078G_0002 CGP 16:92346001-92466146

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002070 IMP epithelial cell maturation
GO:0006487 ISS protein N-linked glycosylation
GO:0006493 ISS protein O-linked glycosylation
GO:0016324 IDA apical plasma membrane
GO:0060047 IMP heart contraction
GO:0071805 IEA potassium ion transmembrane transport
GO:0086091 IMP regulation of heart rate by cardiac conduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337385 KCNE1-201 protein_coding Homo_sapiens 0 375
ENST00000399284 KCNE1-005 protein_coding Homo_sapiens 0 372
ENST00000399286 KCNE1-002 protein_coding Homo_sapiens 0 375
ENST00000399289 KCNE1-001 protein_coding Homo_sapiens 0 375
ENST00000416357 KCNE1-003 protein_coding Homo_sapiens 0 372
ENST00000432085 KCNE1-202 protein_coding Homo_sapiens 0 375
ENST00000611936 KCNE1-203 protein_coding Homo_sapiens 0 375
ENST00000617668 CH507-396I9.6-003 protein_coding Homo_sapiens 0 276
ENST00000618699 CH507-396I9.6-001 protein_coding Homo_sapiens 0 370
ENST00000621601 KCNE1-204 protein_coding Homo_sapiens 0 375
ENST00000622690 CH507-396I9.6-201 protein_coding Homo_sapiens 0 370
ENST00000623803 CH507-396I9.6-002 protein_coding Homo_sapiens 0 370

Loading