C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | high mobility group box transcription factor 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000167458  |
Hbp1-002 |
ENSMUSG00000002996 |
10090 | - |
12:31929383-31950223  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00063K | CIL_00063K_0003 | CGP | 12:31654869-31937630 |
| CIL_0002NG | CIL_0002NG_0002 | CGP | 12:31706867-31950535 |
| CIL_00055N | CIL_00055N_0002 | CGP | 12:31926254-32061296 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003723 | IEA | RNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000222574
|
HBP1-001 | protein_coding | Homo_sapiens | 0 | 1956 |
|
ENST00000461963
|
HBP1-010 | processed_transcript | Homo_sapiens | 0 | 468 |
|
ENST00000463202
|
HBP1-012 | retained_intron | Homo_sapiens | 0 | 1956 |
|
ENST00000463790
|
HBP1-014 | nonsense_mediated_decay | Homo_sapiens | 0 | 298 |
|
ENST00000464009
|
HBP1-008 | protein_coding | Homo_sapiens | 0 | 532 |
|
ENST00000468401
|
HBP1-006 | protein_coding | Homo_sapiens | 2e-37 | 159 |
|
ENST00000468410
|
HBP1-002 | protein_coding | Homo_sapiens | 0 | 2006 |
|
ENST00000478930
|
HBP1-004 | protein_coding | Homo_sapiens | 0 | 339 |
|
ENST00000479011
|
HBP1-009 | protein_coding | Homo_sapiens | 0 | 490 |
|
ENST00000483809
|
HBP1-011 | retained_intron | Homo_sapiens | 0 | 387 |
|
ENST00000485846
|
HBP1-003 | protein_coding | Homo_sapiens | 0 | 1956 |
|
ENST00000497535
|
HBP1-007 | protein_coding | Homo_sapiens | 0 | 475 |
|
ENST00000498408
|
HBP1-013 | protein_coding | Homo_sapiens | 0 | 1897 |
|
ENST00000607681
|
HBP1-015 | protein_coding | Homo_sapiens | 0 | 435 |
