C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HMG-box transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485846 HBP1-003 ENSG00000105856 9606 + 7:107169773-107201635 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLungOvaryTestisENST00000485846
Transcript ID Adrenal Breast Lung Ovary Testis
ENST00000485846 10.815±0.00 4.880±0.00 11.254±0.00 9.837±0.00 10.998±3.30

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007050 NAS cell cycle arrest
GO:0016055 IEA Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172314 Hbp1-001 protein_coding Mus_musculus 0 2344
ENSMUST00000167458 Hbp1-002 protein_coding Mus_musculus 0 1956
ENSMUST00000190885 RP24-571A14.1-001 processed_pseudogene Mus_musculus 0 1507
ENSMUST00000175686 Hbp1-004 protein_coding Mus_musculus 0 1496
ENSMUST00000176520 Hbp1-007 protein_coding Mus_musculus 0 1186
ENSMUST00000176103 Hbp1-003 protein_coding Mus_musculus 0 1040
ENSMUST00000176084 Hbp1-006 protein_coding Mus_musculus 0 961
ENSMUST00000176643 Hbp1-008 protein_coding Mus_musculus 0 684
ENSMUST00000176138 Hbp1-009 retained_intron Mus_musculus 0 569
ENSMUST00000175666 Hbp1-005 retained_intron Mus_musculus 0 566

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