C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coactosin-like 1 (Dictyostelium)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168698 Cotl1-202 ENSMUSG00000031827 10090 - 8:119809225-119840522 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000168698
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000168698 9.532±4.15 6.451±0.97 6.736±0.66 10.666±0.53 16.299±13.37 11.868±2.68 1.075±0.42 27.775±4.21 5.345±2.42 14.607±2.15 12.235±4.22 21.606±13.70 2.077±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002K5 CIL_0002K5_0002 CGP 8:119760587-119840579
CIL_0002K4 CIL_0002K4_0002 CGP 8:119809225-119876988

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IDA actin binding
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0016020 IEA membrane
GO:0019899 IPI enzyme binding
GO:0050832 IDA defense response to fungus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262428 COTL1-001 protein_coding Homo_sapiens 0 521
ENST00000564662 COTL1-005 retained_intron Homo_sapiens 0 263
ENST00000567786 COTL1-007 protein_coding Homo_sapiens 9e-16 88

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