C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class V, type 10A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168747 Atp10a-201 ENSMUSG00000025324 10090 + 7:58658202-58829426 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000168747
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000168747 5.784±1.06 20.195±1.87 4.856±0.22 0.761±0.29 2.848±1.01 2.673±0.64 0.583±0.19 0.752±0.11 0.328±0.23 5.400±0.55 0.351±0.14 11.116±2.46 1.955±1.19 7.857±6.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007CV CIL_0007CV_0002 CGP 7:57590518-58829426
CIL_0006OR CIL_0006OR_0002 CGP 7:58658202-59306727

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000086533 atp10a-001 protein_coding Danio_rerio 0 375
ENSDART00000086525 atp10d-201 protein_coding Danio_rerio 0 209
ENSDART00000143557 atp10d-002 protein_coding Danio_rerio 0 209
ENSDART00000108543 atp10d-001 protein_coding Danio_rerio 0 209
ENST00000356865 ATP10A-001 protein_coding Homo_sapiens 0 3868
ENST00000389967 ATP10A-003 nonsense_mediated_decay Homo_sapiens 0 503
ENST00000555756 ATP10A-004 protein_coding Homo_sapiens 5e-27 124
ENST00000555815 ATP10A-002 nonsense_mediated_decay Homo_sapiens 0 3845
ENST00000619904 ATP10A-201 protein_coding Homo_sapiens 0 503

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