C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 595
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169142 Zfp595-003 ENSMUSG00000057842 10090 - 13:67313720-67332560 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartOvaryENSMUST00000169142
Transcript ID Heart Ovary
ENSMUST00000169142 0.183±0.00 0.288±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EV CIL_0005EV_0002 CGP 13:67292450-67332560
CIL_00020L CIL_00020L_0002 CGP 13:67312998-67360536

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000127877 zgc:113443-204 protein_coding Danio_rerio 0.0000009 60
ENSDART00000081389 zgc:113443-201 protein_coding Danio_rerio 0.0000009 60
ENSDART00000106504 zgc:113443-001 protein_coding Danio_rerio 0.0000009 60
ENSDART00000140273 BX640584.4-201 protein_coding Danio_rerio 0.000003 58
ENSDART00000106571 AL935044.2-201 protein_coding Danio_rerio 0.00001 57
ENST00000269834 ZIM3-001 protein_coding Homo_sapiens 0.000000002 69
ENST00000270649 ZNF614-001 protein_coding Homo_sapiens 0.000002 60
ENST00000282869 ZNF117-002 protein_coding Homo_sapiens 0 508
ENST00000377073 ZNF157-001 protein_coding Homo_sapiens 0.00004 55
ENST00000426739 ZNF234-001 protein_coding Homo_sapiens 0.0000000002 73
ENST00000502412 ZFP62-002 protein_coding Homo_sapiens 0.000000008 68
ENST00000512132 ZFP62-001 protein_coding Homo_sapiens 0.000000009 68
ENST00000527289 CTD-2342I9.1-001 processed_pseudogene Homo_sapiens 0.0000007 60
ENST00000592437 ZNF234-002 protein_coding Homo_sapiens 0.0000000001 73
ENST00000620222 ZNF117-202 protein_coding Homo_sapiens 0 508

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