C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169303 Ppfia2-202 ENSMUSG00000053825 10090 + 10:106470346-106777999 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartLiverLungOvaryPlacentaENSMUST00000169303
Transcript ID Adrenal Bladder Breast Colon Heart Liver Lung Ovary Placenta
ENSMUST00000169303 0.117±0.04 0.023±0.00 0.037±0.02 0.016±0.00 0.027±0.00 0.005±0.00 0.069±0.01 0.042±0.02 0.010±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0007160 IEA cell-matrix adhesion
GO:0007165 IEA signal transduction
GO:0008150 ND biological_process
GO:0032403 IDA protein complex binding
GO:0045202 IDA synapse
GO:0048786 IEA presynaptic active zone

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333447 PPFIA2-201 protein_coding Homo_sapiens 0 355
ENST00000407050 PPFIA2-006 protein_coding Homo_sapiens 0 483
ENST00000443686 PPFIA2-008 protein_coding Homo_sapiens 0 355
ENST00000545296 PPFIA2-007 processed_transcript Homo_sapiens 0 484
ENST00000547623 PPFIA2-014 protein_coding Homo_sapiens 0 628
ENST00000548453 PPFIA2-015 processed_transcript Homo_sapiens 0 484
ENST00000548586 PPFIA2-004 protein_coding Homo_sapiens 0 1181
ENST00000548790 PPFIA2-017 protein_coding Homo_sapiens 7e-39 165
ENST00000549325 PPFIA2-003 protein_coding Homo_sapiens 0 614
ENST00000549396 PPFIA2-001 protein_coding Homo_sapiens 0 1037
ENST00000550359 PPFIA2-009 protein_coding Homo_sapiens 0 484
ENST00000550584 PPFIA2-002 protein_coding Homo_sapiens 0 1181
ENST00000550798 PPFIA2-013 retained_intron Homo_sapiens 0 556
ENST00000551442 PPFIA2-012 protein_coding Homo_sapiens 0 470
ENST00000552020 PPFIA2-016 retained_intron Homo_sapiens 0 577
ENST00000552948 PPFIA2-005 protein_coding Homo_sapiens 0 1179

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