C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053825 Ppfia2 10090 + 10:106470310-106933467 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029404 Ppfia2-201 106470310-106933467 protein_coding
  ENSMUST00000169303 Ppfia2-202 106470346-106777999 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029404ENSMUST00000169303
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029404 0.121±0.03 0.308±0.09 0.043±0.01 14.204±6.79 0.028±0.01 0.052±0.04 0.066±0.01 0.052±0.01 0.026±0.02 0.056±0.05 0.030±0.01 0.078±0.06 0.032±0.03 0.635±0.23
ENSMUST00000169303 N/A 0.117±0.04 0.023±0.00 N/A 0.037±0.02 0.016±0.00 0.027±0.00 N/A 0.005±0.00 0.069±0.01 N/A 0.042±0.02 0.010±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0007160 IEA cell-matrix adhesion
GO:0007165 IEA signal transduction
GO:0008150 ND biological_process
GO:0032403 IDA protein complex binding
GO:0045202 IDA synapse
GO:0048786 IEA presynaptic active zone
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013000 ppfia2 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 protein_coding Danio_rerio
ENSG00000139220 PPFIA2 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 protein_coding Homo_sapiens

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