C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTF8, chromosome transmission fidelity factor 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169312 Chtf8-003 ENSMUSG00000046691 10090 - 8:106883890-106893593 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainOvaryPlacentaENSMUST00000169312
Transcript ID Adipose Brain Ovary Placenta
ENSMUST00000169312 6.253±0.00 2.632±0.00 13.129±9.35 8.538±3.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004I6 CIL_0004I6_0002 CGP 8:106683068-106884566
CIL_0004I7 CIL_0004I7_0002 CGP 8:106870242-106893601
CIL_0004CT CIL_0004CT_0002 CGP 8:106883863-106923093

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219322 HAS3-002 protein_coding Homo_sapiens 0 289
ENST00000306585 CHTF8-011 protein_coding Homo_sapiens 0 1733
ENST00000398235 CHTF8-002 protein_coding Homo_sapiens 0 918
ENST00000414660 CHTF8P1-001 processed_pseudogene Homo_sapiens 0 931
ENST00000448552 CHTF8-001 protein_coding Homo_sapiens 0 1733
ENST00000518041 CHTF8-008 protein_coding Homo_sapiens 0 237
ENST00000519520 CHTF8-003 protein_coding Homo_sapiens 0 761
ENST00000519534 CHTF8-009 nonsense_mediated_decay Homo_sapiens 0 573
ENST00000520529 CHTF8-006 protein_coding Homo_sapiens 0 457
ENST00000522091 CHTF8-004 protein_coding Homo_sapiens 0 281
ENST00000522497 CHTF8-005 protein_coding Homo_sapiens 0 682
ENST00000523421 CHTF8-007 protein_coding Homo_sapiens 0 239
ENST00000567763 CHTF8-010 protein_coding Homo_sapiens 0 861

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