C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004I6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103047-ENSG00000103044 CGP 9606 16:68843604-69118719
GeneTranscriptPositionBiotype
ENSG00000103047 (TANGO6)
transport and golgi organization 6 homolog (Drosophila) 		ENST00000261778 (TANGO6-001) 68843606-69085180 protein_coding
ENST00000561566 (TANGO6-004) 68860165-68863160 retained_intron
ENST00000561856 (TANGO6-007) 68909380-68927769 nonsense_mediated_decay
ENST00000561931 (TANGO6-011) 69026575-69083846 processed_transcript
ENST00000562000 (TANGO6-008) 68973040-69083515 processed_transcript
ENST00000562491 (TANGO6-006) 68900238-68907533 retained_intron
ENST00000564180 (TANGO6-002) 68843604-68867976 retained_intron
ENST00000565037 (TANGO6-003) 68843614-68846893 processed_transcript
ENST00000565852 (TANGO6-005) 68875224-68902442 nonsense_mediated_decay
ENST00000568361 (TANGO6-010) 68973872-69083543 retained_intron
ENSG00000199979 (Y_RNA)
Y RNA 		ENST00000363109 (Y_RNA.1-298) 68885576-68885677 misc_RNA
ENSG00000244378 (RPS2P45)
ribosomal protein S2 pseudogene 45 		ENST00000469997 (RPS2P45-002) 69033986-69036042 processed_transcript
ENST00000490535 (RPS2P45-001) 69033675-69034521 transcribed_processed_pseudogene
ENSG00000266801 (RP11-521L9.2)
 ENST00000568179 (RP11-521L9.2-001) 68933820-68937725 sense_intronic
ENSG00000275504 (U7)
U7 small nuclear RNA 		ENST00000610841 (U7.1-206) 68926894-68926957 snRNA
CIL_0004I6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041949-ENSMUSG00000031910 CGP 10090 8:106683068-106884566
GeneTranscriptPositionBiotype
ENSMUSG00000031910 (Has3)
hyaluronan synthase 3 		ENSMUST00000034385 (Has3-001) 106870242-106882902 protein_coding
ENSMUST00000175987 (Has3-003) 106870891-106884566 protein_coding
ENSMUST00000176144 (Has3-002) 106870836-106881197 protein_coding
ENSMUSG00000041949 (Tango6)
transport and golgi organization 6 		ENSMUST00000048359 (Tango6-201) 106683068-106851439 protein_coding
ENSMUSG00000046691 (Chtf8)
CTF8, chromosome transmission fidelity factor 8 		ENSMUST00000169312 (Chtf8-003) 106883890-106893593 protein_coding
ENSMUST00000175940 (Chtf8-002) 106883894-106893215 protein_coding
ENSMUST00000176090 (Chtf8-006) 106886045-106893515 protein_coding
ENSMUST00000176437 (Chtf8-004) 106885946-106893591 protein_coding
ENSMUST00000176515 (Chtf8-005) 106886122-106893601 protein_coding
ENSMUST00000177068 (Chtf8-001) 106883863-106893593 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004I6_0001ENSG00000103047ENST00000261778ENST00000561566ENST00000561856ENST00000561931ENST00000562000ENST00000562491ENST00000564180ENST00000565037ENST00000565852ENST00000568361ENSG00000199979ENST00000363109ENSG00000244378ENST00000469997ENST00000490535ENSG00000266801ENST00000568179ENSG00000275504ENST00000610841CIL_0004I6_0002ENSMUSG00000031910ENSMUST00000034385ENSMUST00000175987ENSMUST00000176144ENSMUSG00000041949ENSMUST00000048359ENSMUSG00000046691ENSMUST00000169312ENSMUST00000175940ENSMUST00000176090ENSMUST00000176437ENSMUST00000176515ENSMUST00000177068
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004I6_0001ENSG00000103047ENST00000261778ENST00000561566ENST00000565852ENST00000568361ENSG00000199979ENST00000363109ENSG00000244378ENST00000469997ENST00000490535ENSG00000266801ENST00000568179ENSG00000275504ENST00000610841CIL_0004I6_0002ENSMUSG00000031910ENSMUST00000034385ENSMUSG00000041949ENSMUST00000048359ENSMUSG00000046691ENSMUST00000169312ENSMUST00000175940ENSMUST00000176090ENSMUST00000177068
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103047 ENST00000261778 2.465±0.00 2.138±0.00 1.395±0.00 1.595±0.65 N/A 1.188±0.75 1.053±0.35 1.836±1.08 3.617±0.00 2.062±0.23 4.281±0.00 1.703±1.29 1.857±0.30 2.293±0.02
ENST00000561566 N/A N/A N/A 3.294±0.00 N/A 2.526±0.00 N/A N/A 7.118±0.00 7.132±0.00 N/A N/A N/A N/A
ENST00000561856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565852 N/A N/A N/A N/A N/A 2.983±0.00 N/A N/A N/A N/A N/A 2.937±0.00 N/A N/A
ENST00000568361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.771±0.00 4.177±0.00 N/A
ENSG00000199979 ENST00000363109 N/A 1.310±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000244378 ENST00000469997 0.073±0.00 0.231±0.00 N/A 0.198±0.00 0.094±0.04 0.042±0.02 0.022±0.00 0.018±0.00 0.183±0.17 0.144±0.11 N/A 0.046±0.01 0.055±0.00 0.244±0.13
ENST00000490535 N/A N/A N/A N/A 0.273±0.00 0.397±0.00 0.088±0.00 0.241±0.00 N/A N/A N/A 0.153±0.00 0.104±0.00 0.628±0.28
ENSG00000266801 ENST00000568179 N/A 0.331±0.00 N/A N/A 0.088±0.00 0.084±0.00 0.058±0.00 0.090±0.00 0.471±0.12 0.036±0.00 N/A 0.082±0.03 N/A 0.142±0.06
ENSG00000275504 ENST00000610841 N/A 1.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031910 ENSMUST00000034385 N/A N/A 1.460±0.00 3.305±0.10 N/A N/A N/A N/A N/A N/A 0.347±0.00 N/A N/A N/A
ENSMUST00000175987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041949 ENSMUST00000048359 2.820±0.45 3.060±0.44 1.487±0.15 1.296±0.51 2.025±0.83 1.792±0.28 1.314±0.40 2.057±0.62 1.476±0.59 1.949±0.42 0.877±0.34 4.047±1.54 0.907±0.60 0.996±0.22
ENSMUSG00000046691 ENSMUST00000169312 6.253±0.00 N/A N/A 2.632±0.00 N/A N/A N/A N/A N/A N/A N/A 13.129±9.35 8.538±3.83 N/A
ENSMUST00000175940 N/A 16.272±6.49 N/A N/A 13.165±3.92 N/A N/A N/A N/A N/A N/A 13.462±3.47 5.641±2.22 N/A
ENSMUST00000176090 N/A N/A N/A 5.989±0.00 N/A N/A N/A N/A N/A N/A N/A 16.725±0.00 4.668±0.00 N/A
ENSMUST00000176437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177068 31.240±7.75 14.437±3.66 24.110±1.96 11.686±8.19 22.776±5.87 24.658±5.58 10.849±1.03 28.576±2.16 16.988±4.12 28.299±4.58 3.155±0.97 26.159±9.84 11.492±8.13 11.730±5.25

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