C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spleen focus forming virus (SFFV) proviral integration oncogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169852 Spi1-003 ENSMUSG00000002111 10090 + 2:91082390-91114366 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryTestisENSMUST00000169852
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENSMUST00000169852 7.760±0.72 0.844±0.18 17.635±1.90 4.471±0.00 2.040±0.87 2.533±0.92 9.883±0.00 0.643±0.00 4.470±2.66 0.466±0.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000979 IDA RNA polymerase II core promoter sequence-specific DNA binding
GO:0001944 IMP vasculature development
GO:0002320 IMP lymphoid progenitor cell differentiation
GO:0002573 IMP myeloid leukocyte differentiation
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IC transcription factor complex
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0030098 IDA lymphocyte differentiation
GO:0030218 IMP erythrocyte differentiation
GO:0030225 IDA macrophage differentiation
GO:0030851 IDA granulocyte differentiation
GO:0035019 IDA somatic stem cell maintenance
GO:0043011 IMP myeloid dendritic cell differentiation
GO:0043565 IDA sequence-specific DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0060033 IMP anatomical structure regression
GO:1902262 IMP apoptotic process involved in patterning of blood vessels

Homologs

No Homologs available.

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