C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain adjacent to zinc finger domain, 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170054 Baz2a-202 ENSMUSG00000040054 10090 + 10:128092783-128129303 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000170054
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000170054 4.525±1.17 4.196±1.08 2.941±0.22 3.305±0.83 4.989±0.77 5.958±0.39 1.964±0.68 2.661±0.28 2.169±0.96 4.859±0.59 1.354±0.45 4.648±1.36 6.338±2.63 15.577±1.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000183 IDA chromatin silencing at rDNA
GO:0003677 IDA DNA binding
GO:0003723 IDA RNA binding
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0006338 IGI chromatin remodeling
GO:0008270 IEA zinc ion binding
GO:0034770 IDA histone H4-K20 methylation
GO:0051567 IDA histone H3-K9 methylation
GO:0070869 IDA heterochromatin assembly involved in chromatin silencing
GO:0070933 IDA histone H4 deacetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262031 RBMS2-001 protein_coding Homo_sapiens 0 357
ENST00000379441 BAZ2A-002 protein_coding Homo_sapiens 0 5648
ENST00000546695 BAZ2A-008 protein_coding Homo_sapiens 0 649
ENST00000547453 BAZ2A-016 protein_coding Homo_sapiens 0 254
ENST00000547647 BAZ2A-010 processed_transcript Homo_sapiens 0 488
ENST00000547650 BAZ2A-012 protein_coding Homo_sapiens 0 667
ENST00000549327 BAZ2A-011 processed_transcript Homo_sapiens 3e-24 115
ENST00000549506 BAZ2A-006 protein_coding Homo_sapiens 0 641
ENST00000549787 BAZ2A-004 protein_coding Homo_sapiens 0 2555
ENST00000549884 BAZ2A-003 protein_coding Homo_sapiens 0 6152
ENST00000550730 BAZ2A-005 processed_transcript Homo_sapiens 0 460
ENST00000551759 BAZ2A-015 retained_intron Homo_sapiens 0 326
ENST00000551812 BAZ2A-001 protein_coding Homo_sapiens 0 6613
ENST00000551959 BAZ2A-007 processed_transcript Homo_sapiens 0 464
ENST00000551996 BAZ2A-009 protein_coding Homo_sapiens 0 507
ENST00000553222 BAZ2A-017 processed_transcript Homo_sapiens 0 575
ENST00000605342 RP11-197B12.1-001 processed_pseudogene Homo_sapiens 8e-37 156

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