C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of Ty 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170552 Supt20-201 ENSMUSG00000027751 10090 + 3:54693105-54716837 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000170552
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000170552 7.555±0.00 16.147±0.00 19.815±15.95 6.588±0.00 10.325±2.01 5.665±0.00 11.881±5.23 11.387±0.00 2.108±1.19 16.772±3.66 17.154±5.81 81.632±5.95

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000124 IEA SAGA complex
GO:0003712 IEA transcription cofactor activity
GO:0007369 IEA gastrulation
GO:0035948 IGI positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000350612 SUPT20H-016 protein_coding Homo_sapiens 0 1845
ENST00000356185 SUPT20H-007 protein_coding Homo_sapiens 0 1866
ENST00000360252 SUPT20H-001 protein_coding Homo_sapiens 0 1866
ENST00000464572 SUPT20H-002 retained_intron Homo_sapiens 0 387
ENST00000464744 SUPT20H-017 protein_coding Homo_sapiens 0 1866
ENST00000466563 SUPT20H-012 processed_transcript Homo_sapiens 0 473
ENST00000469488 SUPT20H-009 protein_coding Homo_sapiens 0 351
ENST00000470359 SUPT20H-003 processed_transcript Homo_sapiens 0 562
ENST00000475892 SUPT20H-021 protein_coding Homo_sapiens 0 1845
ENST00000476109 SUPT20H-004 processed_transcript Homo_sapiens 0 577
ENST00000476539 SUPT20H-015 processed_transcript Homo_sapiens 0 363
ENST00000478911 SUPT20H-023 retained_intron Homo_sapiens 0 276
ENST00000483241 SUPT20H-005 processed_transcript Homo_sapiens 0 387
ENST00000484078 SUPT20H-019 retained_intron Homo_sapiens 0 267
ENST00000490602 SUPT20H-014 processed_transcript Homo_sapiens 0 283
ENST00000490716 SUPT20H-018 nonsense_mediated_decay Homo_sapiens 0 1975
ENST00000493537 SUPT20H-011 retained_intron Homo_sapiens 0 1860
ENST00000495071 SUPT20H-013 nonsense_mediated_decay Homo_sapiens 0 1099
ENST00000497318 SUPT20H-008 protein_coding Homo_sapiens 0 808
ENST00000542180 SUPT20H-201 protein_coding Homo_sapiens 0 1845

Loading